Os01g0625200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Kinesin, motor region domain containing protein.
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Os01g0625200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Kinesin, motor region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 384.76 | 0.922 | 7.76 | -3.2 | 2.82 | 2.58 | 1.96 | 1.42 | -0.699 | 5.92 | 92.71 | 830 | 15.7 | 7.55 |
| 388.41 | 0.918 | 7.76 | -3.25 | 2.8 | 2.62 | 2.27 | -- | -0.693 | 5.88 | 92.72 | 839 | 15.6 | 7.62 |
| 392.46 | 0.923 | 7.77 | -3.18 | 2.67 | 2.79 | -- | 1.88 | -0.746 | 6.18 | 96.83 | 838 | 15.7 | 7.24 |
| 395.37 | 0.926 | 7.78 | -3.34 | 3.11 | 2.47 | -- | -- | -0.768 | 5.9 | 92.24 | 865 | 15.1 | 5.53 |
| 405.74 | 0.938 | 7.82 | -2.92 | -- | 4.66 | -- | 4.98 | -0.661 | -- | 161.1 | 895 | 14.7 | 14.1 |
| 544.03 | 1.09 | 7.78 | -3.28 | 3.79 | -- | 2 | -- | -0.77 | 4.57 | -- | -- | -- | -- |
| 554.69 | 1.1 | 7.79 | -3.3 | 3.8 | -- | -- | -- | -0.78 | 4.54 | -- | -- | -- | -- |
| 398.41 | 0.93 | 7.84 | -3.32 | -- | 5.22 | -- | -- | -0.794 | -- | 136 | 888 | 14.6 | 14.9 |
| 543.59 | 1.09 | 7.71 | -- | 3.99 | 3.01 | -- | -- | -0.656 | 4.84 | 107 | 29172 | 15.1 | 3.31 |
| 1325.3 | 1.7 | 7.82 | -3.15 | -- | -- | -- | -- | -0.68 | -- | -- | -- | -- | -- |
| 841.06 | 1.36 | 7.71 | -- | 3.74 | -- | -- | -- | -0.413 | 4.57 | -- | -- | -- | -- |
| 686.52 | 1.22 | 7.79 | -- | -- | 5.39 | -- | -- | -0.5 | -- | 128.4 | 850 | 15.1 | 15.3 |
| 1586.89 | 1.86 | 7.74 | -- | -- | -- | -- | -- | -0.331 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 405.29 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 4 | 408.54 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 9 | 409.69 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 8 |
| 14 | 410.78 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 34 | 412.88 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 112 | 420.71 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 130 | 421.47 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 11 |
| 141 | 422.23 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 14 |
| 142 | 422.24 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 156 | 422.45 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 161 | 422.78 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 8 |
| 165 | 422.97 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 197 | 426.17 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 236 | 428.47 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 18 |
| 274 | 429.96 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 300 | 430.49 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 311 | 430.79 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 9 |
| 318 | 430.89 | humidity | 60 | 720 | > th | dose dependent | sin | 16 | NA |
| 341 | 431.74 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 389 | 432.80 | humidity | 90 | 720 | < th | dose dependent | sin | 14 | NA |
| 392 | 433.03 | humidity | 80 | 720 | < th | dose dependent | sin | 12 | NA |
| 431 | 433.60 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 451 | 433.89 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 456 | 434.13 | humidity | 70 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 528 | 434.83 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 536 | 435.03 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 538 | 435.05 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 612 | 436.01 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 616 | 436.09 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 674 | 436.85 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 753 | 437.94 | humidity | 80 | 720 | > th | dose independent | rect. | 11 | 13 |
| 810 | 438.56 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 14 |
| 942 | 439.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 3 |
| 946 | 440.05 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 989 | 440.45 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 998 | 440.64 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 999 | 440.65 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 21 |