Os01g0610700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RINGv domain containing protein.
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Os01g0610700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : RINGv domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.85 | 0.243 | 9.42 | -0.215 | 0.518 | -0.308 | 0.0849 | -0.963 | -0.256 | 5.83 | -0.004857 | 4962 | -- | -- |
| 27.71 | 0.245 | 9.39 | -0.229 | 0.495 | -0.401 | 0.226 | -- | -0.222 | 5.89 | 0.4328 | 3042 | -- | -- |
| 26.87 | 0.241 | 9.42 | -0.215 | 0.519 | -0.307 | -- | -0.96 | -0.256 | 5.83 | -0.0001729 | 4962 | -- | -- |
| 27.34 | 0.244 | 9.4 | -0.232 | 0.545 | -0.492 | -- | -- | -0.248 | 5.85 | 0.2393 | 2813 | -- | -- |
| 40.79 | 0.297 | 9.42 | -0.218 | -- | -0.315 | -- | -0.86 | -0.243 | -- | -0.008283 | 4918 | -- | -- |
| 32.01 | 0.265 | 9.39 | -0.361 | 0.515 | -- | 0.0214 | -- | -0.215 | 5.9 | -- | -- | -- | -- |
| 32.01 | 0.265 | 9.39 | -0.361 | 0.515 | -- | -- | -- | -0.215 | 5.89 | -- | -- | -- | -- |
| 41 | 0.298 | 9.41 | -0.178 | -- | -0.6 | -- | -- | -0.237 | -- | 0.07083 | 2067 | -- | -- |
| 28.23 | 0.247 | 9.4 | -- | 0.536 | -0.634 | -- | -- | -0.244 | 5.87 | 0.2621 | 2710 | -- | -- |
| 45.75 | 0.316 | 9.4 | -0.346 | -- | -- | -- | -- | -0.203 | -- | -- | -- | -- | -- |
| 35.45 | 0.279 | 9.38 | -- | 0.509 | -- | -- | -- | -0.175 | 5.93 | -- | -- | -- | -- |
| 41.73 | 0.301 | 9.4 | -- | -- | -0.724 | -- | -- | -0.227 | -- | 0.08005 | 1984 | -- | -- |
| 48.9 | 0.326 | 9.39 | -- | -- | -- | -- | -- | -0.165 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.44 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 2 | 26.52 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 3 | 26.55 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 20 | 12 |
| 5 | 26.60 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 20 | 12 |
| 8 | 26.64 | wind | 1.0 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 14 | 26.66 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 19 | 26.69 | wind | 1.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 20 | 26.69 | wind | 9.0 | 43200 | < th | dose dependent | sin | 10 | NA |
| 21 | 26.69 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 22 | 26.69 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 25 | 26.70 | wind | 1.0 | 43200 | > th | dose dependent | sin | 10 | NA |
| 26 | 26.70 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 27 | 26.71 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 29 | 26.71 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 30 | 26.71 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 53 | 26.75 | wind | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 54 | 26.75 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 69 | 26.79 | wind | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 75 | 26.80 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 79 | 26.81 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 80 | 26.81 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 105 | 26.86 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 114 | 26.88 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 14 |
| 118 | 26.88 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 14 |
| 121 | 26.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 14 |
| 122 | 26.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 17 |
| 123 | 26.89 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 17 |
| 126 | 26.89 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 17 |
| 131 | 26.91 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 145 | 26.92 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 160 | 26.93 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 167 | 26.94 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 178 | 26.96 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 5 |
| 181 | 26.96 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 182 | 26.97 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 0 | NA |
| 188 | 26.97 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 0 | NA |
| 191 | 26.97 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 7 |
| 194 | 26.97 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 202 | 26.98 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 0 | NA |
| 251 | 27.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 254 | 27.02 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 260 | 27.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 267 | 27.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 284 | 27.04 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 1 | NA |
| 285 | 27.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 322 | 27.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 16 |
| 341 | 27.07 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 343 | 27.08 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 393 | 27.11 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 10 |
| 452 | 27.14 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 459 | 27.15 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 460 | 27.15 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 471 | 27.16 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 495 | 27.17 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 5 |
| 505 | 27.17 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 5 |
| 530 | 27.18 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 15 |
| 535 | 27.19 | wind | 3.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 616 | 27.22 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 640 | 27.23 | wind | 3.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 652 | 27.23 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 23 |
| 654 | 27.23 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 23 |
| 671 | 27.23 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 23 |
| 675 | 27.24 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 676 | 27.24 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 688 | 27.24 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 732 | 27.25 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 21 |
| 744 | 27.26 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 23 |
| 746 | 27.26 | precipitation | 0.1 | 4320 | > th | dose dependent | no | NA | NA |
| 747 | 27.26 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 753 | 27.26 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 8 |
| 762 | 27.26 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 17 |
| 771 | 27.26 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 22 |
| 778 | 27.26 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 23 |
| 787 | 27.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 788 | 27.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 9 |
| 796 | 27.27 | wind | 3.0 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 804 | 27.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 9 |
| 810 | 27.27 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 12 |
| 834 | 27.28 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 848 | 27.28 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 17 |
| 850 | 27.28 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 19 |
| 874 | 27.28 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 19 |
| 879 | 27.28 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 23 |
| 880 | 27.28 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 881 | 27.28 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 22 | 23 |
| 891 | 27.29 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 17 |
| 900 | 27.29 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 13 | NA |
| 916 | 27.29 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 17 |
| 970 | 27.30 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 20 |
| 980 | 27.31 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |