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Os01g0610100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Clone ZZZ51 mRNA sequence.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.3 (0.0113) R2 : 0.135
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.201 (0.0238) R2dN8 : 0.175 R2N8 : 0.135
σ : 0.213
deviance : 20.78
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.33 0.178 13.4 -0.474 0.16 0.499 0.0374 -1.33 0.0271 5.11 13.12 1771 -- --
14.99 0.18 13.3 -0.291 0.123 0.52 0.0567 -- 0.0552 4.98 11.98 7195 -- --
14.33 0.176 13.4 -0.476 0.16 0.5 -- -1.34 0.0262 5.24 13.18 1781 -- --
14.99 0.18 13.3 -0.29 0.125 0.528 -- -- 0.0539 5.21 10.4 7195 -- --
15.18 0.181 13.4 -0.473 -- 0.463 -- -1.05 0.0313 -- 12.85 2769 -- --
19.7 0.208 13.3 -0.0204 0.137 -- 0.137 -- 0.196 4.4 -- -- -- --
19.73 0.208 13.3 -0.0213 0.141 -- -- -- 0.196 4.9 -- -- -- --
15.77 0.185 13.3 -0.29 -- 0.541 -- -- 0.0579 -- 10.04 7056 -- --
16.57 0.19 13.3 -- 0.136 0.367 -- -- 0.134 5.09 12 6149 -- --
20.77 0.213 13.3 -0.0161 -- -- -- -- 0.199 -- -- -- -- --
19.74 0.208 13.3 -- 0.14 -- -- -- 0.198 4.91 -- -- -- --
17.18 0.193 13.3 -- -- 0.379 -- -- 0.139 -- 6.784 2696 -- --
20.78 0.213 13.3 -- -- -- -- -- 0.201 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 13.00 radiation 1 14400 > th dose independent rect. 18 12
3 13.08 radiation 1 14400 < th dose independent rect. 18 12
5 13.28 radiation 1 14400 > th dose independent rect. 18 1
15 13.38 wind 1 43200 > th dose dependent rect. 4 12
16 13.39 humidity 90 14400 < th dose independent rect. 17 10
18 13.40 humidity 90 14400 < th dose independent rect. 18 8
21 13.41 wind 3 43200 > th dose independent rect. 3 12
22 13.41 wind 1 43200 > th dose dependent rect. 5 10
26 13.42 wind 9 43200 < th dose dependent rect. 4 12
31 13.44 wind 1 43200 > th dose dependent sin 3 NA
41 13.45 wind 9 43200 < th dose dependent rect. 5 10
47 13.46 wind 3 43200 < th dose independent rect. 3 12
62 13.48 radiation 1 14400 < th dose independent rect. 18 8
64 13.48 wind 3 43200 < th dose independent rect. 4 10
69 13.48 wind 9 43200 < th dose dependent sin 3 NA
70 13.48 wind 3 43200 > th dose dependent rect. 6 1
78 13.49 radiation 1 14400 < th dose independent rect. 18 1
82 13.49 radiation 1 14400 < th dose independent rect. 18 6
100 13.50 humidity 90 14400 > th dose independent rect. 18 9
111 13.50 wind 1 43200 > th dose dependent rect. 20 20
119 13.51 humidity 90 14400 > th dose dependent rect. 19 7
120 13.51 wind 5 43200 < th dose dependent rect. 6 8
128 13.52 humidity 90 14400 < th dose independent rect. 20 5
141 13.53 wind 3 43200 > th dose independent sin 3 NA
147 13.53 humidity 90 14400 > th dose dependent rect. 21 4
155 13.54 humidity 90 14400 < th dose independent rect. 21 2
166 13.54 wind 9 43200 < th dose dependent rect. 20 20
181 13.56 humidity 90 14400 < th dose independent sin 14 NA
190 13.56 humidity 90 14400 > th dose dependent sin 15 NA
208 13.57 humidity 80 43200 < th dose dependent rect. 22 1
215 13.57 humidity 90 14400 > th dose dependent rect. 14 14
227 13.58 wind 3 43200 < th dose independent sin 4 NA
234 13.58 wind 1 43200 > th dose dependent rect. 9 1
291 13.61 humidity 90 14400 > th dose independent sin 14 NA
310 13.62 wind 3 43200 > th dose independent rect. 20 18
314 13.62 wind 3 43200 < th dose dependent rect. 8 4
344 13.63 humidity 90 14400 > th dose dependent rect. 13 18
348 13.64 radiation 1 14400 > th dose independent rect. 5 1
349 13.64 radiation 1 14400 < th dose independent rect. 5 1
382 13.65 humidity 80 43200 > th dose independent rect. 24 1
383 13.65 humidity 80 43200 < th dose independent rect. 23 1
417 13.66 wind 3 43200 < th dose independent rect. 20 18
419 13.66 wind 9 43200 < th dose dependent rect. 9 1
471 13.68 radiation 1 14400 < th dose independent rect. 24 6
496 13.68 wind 1 43200 > th dose dependent rect. 3 19
506 13.69 radiation 1 14400 < th dose independent rect. 3 3
519 13.69 wind 9 43200 < th dose independent rect. 18 20
543 13.69 wind 1 43200 > th dose dependent rect. 15 22
558 13.70 wind 9 43200 > th dose independent rect. 19 19
583 13.70 wind 9 43200 < th dose dependent rect. 3 19
624 13.71 humidity 90 14400 > th dose dependent rect. 22 1
691 13.72 wind 9 43200 < th dose dependent rect. 15 22
724 13.73 wind 1 43200 > th dose dependent no NA NA
819 13.75 humidity 80 43200 > th dose independent rect. 23 6
835 13.75 wind 9 43200 < th dose dependent rect. 6 1
836 13.75 radiation 1 14400 > th dose dependent rect. 18 1
913 13.76 wind 9 43200 < th dose dependent no NA NA
960 13.77 humidity 80 43200 < th dose independent rect. 22 7
999 13.77 wind 1 43200 > th dose dependent rect. 8 23
1000 13.77 wind 1 43200 > th dose dependent rect. 11 23