Os01g0605600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0605600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.53 | 0.179 | 9.9 | 0.245 | 0.371 | 38.5 | -0.479 | 80 | 0.283 | 1.64 | 2 | 3 | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 15.38 | 0.184 | 10.2 | 0.962 | 0.36 | -- | -0.398 | -- | 0.29 | 1.7 | -- | -- | -- | -- |
| 16.01 | 0.187 | 10.2 | 0.975 | 0.36 | -- | -- | -- | 0.292 | 1.63 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 23.91 | 0.228 | 10.2 | 0.99 | -- | -- | -- | -- | 0.3 | -- | -- | -- | -- | -- |
| 41.07 | 0.3 | 10.2 | -- | 0.378 | -- | -- | -- | 0.184 | 1.71 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 49.75 | 0.329 | 10.2 | -- | -- | -- | -- | -- | 0.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.18 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 2 | 14.23 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 12 | 8 |
| 6 | 14.29 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 12 | 3 |
| 8 | 14.30 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 15 | 1 |
| 9 | 14.30 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 4 |
| 10 | 14.30 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 11 | 14.30 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 14 | 14.32 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 4 |
| 20 | 14.33 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 4 |
| 22 | 14.34 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 25 | 14.35 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 20 |
| 29 | 14.35 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 20 | 8 |
| 32 | 14.36 | temperature | 15.0 | 1440 | > th | dose independent | sin | 23 | NA |
| 35 | 14.36 | temperature | 15.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 37 | 14.36 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 41 | 14.36 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 18 | 7 |
| 45 | 14.37 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 46 | 14.37 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 47 | 14.37 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 49 | 14.37 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 11 |
| 51 | 14.37 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 70 | 14.38 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 23 | 6 |
| 71 | 14.38 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 23 | 6 |
| 72 | 14.38 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 10 | 14 |
| 73 | 14.38 | temperature | 15.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 74 | 14.38 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 76 | 14.38 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 82 | 14.38 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 98 | 14.39 | wind | 3.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 99 | 14.39 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 19 | 5 |
| 101 | 14.39 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 4 | 10 |
| 107 | 14.39 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 16 |
| 110 | 14.39 | temperature | 20.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 128 | 14.39 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 4 | 10 |
| 140 | 14.40 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 154 | 14.40 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 6 |
| 157 | 14.40 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 4 | 8 |
| 176 | 14.40 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 15 | 13 |
| 189 | 14.41 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 4 | 7 |
| 192 | 14.41 | wind | 9.0 | 4320 | > th | dose independent | rect. | 23 | 11 |
| 193 | 14.41 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 11 |
| 195 | 14.41 | temperature | 15.0 | 720 | > th | dose independent | rect. | 7 | 14 |
| 207 | 14.41 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 21 | 3 |
| 225 | 14.41 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 2 | 8 |
| 228 | 14.41 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 16 | 10 |
| 251 | 14.42 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 23 | 8 |
| 252 | 14.42 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 16 |
| 256 | 14.42 | temperature | 20.0 | 30 | < th | dose dependent | sin | 13 | NA |
| 259 | 14.42 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 21 | 1 |
| 265 | 14.42 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 2 | 4 |
| 276 | 14.42 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 23 | 8 |
| 284 | 14.42 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 13 | 12 |
| 298 | 14.43 | temperature | 15.0 | 720 | > th | dose independent | rect. | 11 | 8 |
| 313 | 14.43 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 2 | 2 |
| 323 | 14.43 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 340 | 14.43 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 15 | 9 |
| 351 | 14.43 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 18 | 11 |
| 392 | 14.44 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 19 | 3 |
| 393 | 14.44 | wind | 3.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 394 | 14.44 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 395 | 14.44 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 396 | 14.44 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 12 | 12 |
| 405 | 14.44 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 420 | 14.44 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 8 |
| 461 | 14.45 | temperature | 15.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 463 | 14.45 | radiation | 1.0 | 720 | < th | dose independent | rect. | 12 | 2 |
| 464 | 14.45 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 469 | 14.45 | temperature | 15.0 | 720 | > th | dose independent | rect. | 14 | 7 |
| 470 | 14.45 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 10 | 10 |
| 471 | 14.45 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 14 |
| 481 | 14.45 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 12 | 2 |
| 498 | 14.45 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 18 | 10 |
| 552 | 14.46 | temperature | 15.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 567 | 14.46 | temperature | 15.0 | 10 | > th | dose independent | rect. | 18 | 12 |
| 652 | 14.47 | wind | 5.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 653 | 14.47 | wind | 5.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 656 | 14.47 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 664 | 14.47 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 17 | 7 |
| 737 | 14.48 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 749 | 14.48 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 849 | 14.49 | temperature | 15.0 | 1440 | < th | dose independent | sin | 20 | NA |
| 869 | 14.49 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 906 | 14.49 | temperature | 15.0 | 4320 | < th | dose dependent | sin | 3 | NA |
| 915 | 14.49 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |