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Os01g0602800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Dual-specific kinase DSK1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0237) R2 : 0.536
β1 : -1.37 (0.0866) R2dD : 0.264 R2D : 0.238
β2 : 1.05 (0.0618) R2dC : 0.294 R2C : 0.28
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.137 (0.0505) R2dN8 : 0.00997 R2N8 : -0.0131
σ : 0.445
deviance : 90.23
__
_____
C
peak time of C : 6.11
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
75.51 0.408 10.7 -1.51 1.03 0.766 0.503 0.137 -0.064 6.45 72.82 1219 -- --
75.53 0.405 10.7 -1.52 1.02 0.776 0.508 -- -0.0648 6.45 73.03 1218 -- --
76.06 0.406 10.7 -1.49 1.03 0.769 -- 0.178 -0.0708 6.58 73.88 1215 -- --
76.08 0.406 10.7 -1.52 1.03 0.794 -- -- -0.0676 6.59 73.19 1216 -- --
129.96 0.531 10.7 -1.48 -- 0.82 -- 0.181 -0.077 -- 79 1290 -- --
88.94 0.442 10.7 -1.38 1.04 -- 0.776 -- -0.134 5.91 -- -- -- --
90.23 0.445 10.7 -1.37 1.05 -- -- -- -0.137 6.11 -- -- -- --
130.04 0.531 10.7 -1.49 -- 0.836 -- -- -0.0772 -- 78.74 1290 -- --
101.2 0.469 10.7 -- 0.941 1.23 -- -- 0.0344 6.76 67.84 30794 -- --
147.16 0.567 10.7 -1.34 -- -- -- -- -0.113 -- -- -- -- --
139.73 0.553 10.7 -- 1.03 -- -- -- 0.016 6.18 -- -- -- --
151.77 0.574 10.7 -- -- 1.39 -- -- 0.119 -- 68 28629 -- --
194.57 0.651 10.7 -- -- -- -- -- 0.0356 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 70.31 wind 7.0 270 < th dose independent rect. 15 15
2 70.41 precipitation 0.1 270 < th dose independent rect. 15 15
3 70.41 precipitation 0.1 270 < th dose dependent rect. 15 15
4 70.55 humidity 50.0 30 > th dose dependent rect. 19 9
5 70.56 precipitation 0.1 270 < th dose independent rect. 2 17
6 70.56 precipitation 0.1 270 < th dose dependent rect. 2 17
7 70.59 precipitation 0.1 90 < th dose independent rect. 4 15
8 70.59 precipitation 0.1 90 < th dose dependent rect. 4 15
9 70.77 radiation 1.0 270 < th dose dependent rect. 11 15
11 70.83 temperature 15.0 270 > th dose independent rect. 19 7
13 70.85 temperature 10.0 90 > th dose independent rect. 19 9
14 70.85 temperature 30.0 90 < th dose independent rect. 19 9
15 70.85 humidity 50.0 90 > th dose independent rect. 19 9
17 70.85 atmosphere 995.0 90 > th dose independent rect. 19 9
18 70.85 radiation 1.0 90 < th dose independent rect. 19 9
23 70.85 temperature 10.0 90 > th dose independent rect. 4 15
24 70.85 atmosphere 1015.0 90 < th dose independent rect. 4 15
25 70.85 radiation 1.0 90 < th dose dependent rect. 19 9
33 70.92 wind 9.0 90 < th dose independent rect. 19 9
34 70.93 radiation 40.0 270 < th dose dependent rect. 2 7
35 70.95 wind 9.0 270 < th dose independent rect. 6 9
36 71.00 precipitation 0.1 270 < th dose independent rect. 6 9
37 71.00 precipitation 0.1 270 < th dose dependent rect. 6 9
43 71.10 temperature 10.0 270 > th dose independent rect. 6 9
44 71.10 atmosphere 1015.0 270 < th dose independent rect. 6 9
45 71.10 temperature 10.0 270 > th dose independent rect. 15 15
46 71.10 atmosphere 995.0 90 > th dose independent rect. 4 15
51 71.17 humidity 60.0 270 > th dose independent rect. 19 7
53 71.18 temperature 30.0 270 < th dose independent rect. 19 7
55 71.18 atmosphere 995.0 270 > th dose independent rect. 19 7
56 71.18 radiation 1.0 270 < th dose independent rect. 19 7
61 71.18 temperature 10.0 270 > th dose independent rect. 2 17
62 71.18 atmosphere 1015.0 270 < th dose independent rect. 2 17
63 71.18 wind 9.0 90 < th dose dependent rect. 3 6
64 71.18 radiation 1.0 270 < th dose dependent rect. 19 7
70 71.20 radiation 40.0 270 < th dose independent rect. 15 15
71 71.22 precipitation 0.1 90 < th dose independent rect. 19 9
72 71.22 precipitation 0.1 90 < th dose dependent rect. 19 9
74 71.25 precipitation 0.1 270 < th dose independent rect. 19 7
75 71.25 precipitation 0.1 270 < th dose dependent rect. 19 7
76 71.26 precipitation 0.1 270 < th dose independent rect. 1 8
77 71.26 precipitation 0.1 270 < th dose dependent rect. 1 8
79 71.27 wind 9.0 270 < th dose independent rect. 19 7
80 71.34 temperature 15.0 270 > th dose independent rect. 9 16
83 71.36 wind 9.0 90 < th dose independent rect. 4 15
86 71.37 temperature 30.0 720 < th dose independent rect. 17 9
87 71.37 radiation 1.0 270 < th dose independent rect. 11 15
88 71.38 radiation 1.0 270 < th dose dependent rect. 17 9
90 71.39 humidity 50.0 270 > th dose dependent rect. 2 7
92 71.40 wind 9.0 270 < th dose independent rect. 2 17
97 71.47 humidity 50.0 270 > th dose dependent rect. 19 7
99 71.48 wind 9.0 90 < th dose dependent rect. 4 15
103 71.51 atmosphere 995.0 270 > th dose independent rect. 6 9
105 71.52 wind 9.0 270 < th dose dependent rect. 1 8
108 71.54 temperature 10.0 90 > th dose dependent rect. 3 6
111 71.56 atmosphere 995.0 270 > th dose independent rect. 2 17
113 71.59 precipitation 0.1 90 < th dose independent rect. 3 6
114 71.59 precipitation 0.1 90 < th dose dependent rect. 3 6
119 71.61 temperature 15.0 30 > th dose independent rect. 21 7
122 71.62 wind 7.0 270 < th dose independent rect. 1 8
123 71.63 radiation 1.0 270 < th dose independent rect. 17 9
154 71.72 precipitation 0.1 30 < th dose independent rect. 4 17
156 71.72 precipitation 0.1 30 < th dose dependent rect. 4 17
191 71.82 temperature 15.0 90 > th dose independent rect. 9 18
203 71.88 temperature 30.0 30 < th dose independent rect. 21 7
204 71.88 humidity 50.0 30 > th dose independent rect. 21 7
207 71.88 atmosphere 995.0 30 > th dose independent rect. 21 7
208 71.88 radiation 1.0 30 < th dose independent rect. 21 7
213 71.88 temperature 10.0 270 > th dose independent rect. 1 8
215 71.88 humidity 50.0 270 > th dose independent rect. 1 8
216 71.88 atmosphere 995.0 270 > th dose independent rect. 1 8
217 71.88 atmosphere 1015.0 270 < th dose independent rect. 1 8
218 71.88 atmosphere 995.0 270 > th dose independent rect. 15 15
220 71.88 temperature 10.0 30 > th dose independent rect. 4 17
222 71.88 atmosphere 1015.0 30 < th dose independent rect. 4 17
223 71.88 radiation 1.0 30 < th dose dependent rect. 21 7
230 71.91 wind 9.0 270 < th dose independent rect. 9 16
231 71.91 humidity 50.0 270 > th dose independent rect. 9 17
235 71.92 radiation 30.0 270 < th dose independent rect. 1 8
249 71.95 wind 5.0 90 < th dose independent rect. 3 6
250 71.95 temperature 30.0 270 < th dose independent rect. 1 8
254 71.97 wind 9.0 30 < th dose independent rect. 21 7
270 72.03 temperature 10.0 270 > th dose dependent rect. 1 7
294 72.07 temperature 30.0 720 > th dose dependent rect. 18 1
315 72.09 atmosphere 995.0 30 > th dose independent rect. 4 17
326 72.12 wind 9.0 90 < th dose independent rect. 9 18
328 72.14 humidity 50.0 30 > th dose dependent rect. 21 7
344 72.21 precipitation 0.1 30 < th dose independent rect. 21 7
348 72.21 precipitation 0.1 30 < th dose dependent rect. 21 7
359 72.25 temperature 10.0 90 > th dose independent rect. 3 6
361 72.25 humidity 50.0 90 > th dose independent rect. 3 6
362 72.25 atmosphere 995.0 90 > th dose independent rect. 3 6
363 72.25 atmosphere 1015.0 90 < th dose independent rect. 3 6
369 72.26 radiation 1.0 10 < th dose dependent sin 10 NA
408 72.35 radiation 1.0 270 > th dose independent rect. 6 9
410 72.35 wind 9.0 90 < th dose dependent rect. 17 16
417 72.38 humidity 50.0 30 > th dose dependent rect. 4 8
419 72.39 wind 9.0 30 < th dose independent rect. 4 17
420 72.40 humidity 50.0 1440 > th dose independent rect. 16 1
425 72.41 atmosphere 1015.0 270 < th dose independent rect. 19 7
467 72.46 humidity 70.0 720 < th dose dependent rect. 18 2
491 72.49 radiation 40.0 10 < th dose independent rect. 4 6
537 72.56 temperature 10.0 270 > th dose dependent rect. 6 8
544 72.59 precipitation 0.1 270 < th dose independent rect. 9 16
545 72.59 precipitation 0.1 270 < th dose dependent rect. 9 16
546 72.60 atmosphere 1005.0 30 > th dose independent rect. 4 5
596 72.74 humidity 50.0 30 > th dose dependent rect. 4 6
626 72.84 humidity 70.0 720 < th dose independent rect. 18 2
699 72.90 atmosphere 1015.0 90 < th dose independent rect. 19 9
719 72.91 atmosphere 995.0 90 > th dose dependent rect. 3 6
733 72.93 humidity 50.0 1440 < th dose independent rect. 16 1
742 72.94 wind 9.0 30 < th dose dependent rect. 19 9
747 72.95 humidity 50.0 1440 < th dose dependent rect. 16 1
759 72.96 atmosphere 1015.0 30 < th dose independent rect. 21 7
772 72.98 temperature 10.0 270 > th dose dependent rect. 3 3
788 73.03 temperature 10.0 43200 > th dose independent rect. 10 7
795 73.04 temperature 30.0 720 < th dose independent rect. 17 2
848 73.16 wind 1.0 270 > th dose independent rect. 6 9
863 73.20 wind 1.0 270 > th dose independent rect. 19 7
872 73.21 radiation 40.0 90 < th dose dependent rect. 15 18
881 73.26 temperature 30.0 720 > th dose independent rect. 18 1
925 73.33 humidity 70.0 720 > th dose independent rect. 16 4
975 73.44 humidity 50.0 270 > th dose independent rect. 6 8