Os01g0599900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Galactose-binding like domain containing protein.
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Os01g0599900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Galactose-binding like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 140.25 | 0.556 | 3 | -0.142 | 0.157 | 1.77 | -0.331 | -17.7 | -0.0164 | 12.8 | 0.4725 | 119 | 2.05 | 1.09 |
| 149.76 | 0.57 | 3 | -0.0998 | 0.188 | 3.78 | -0.177 | -- | -0.00995 | 13.8 | 0.2221 | 130 | 1.84 | 1.48 |
| 140.44 | 0.552 | 3 | -0.149 | 0.163 | 1.74 | -- | -17.6 | -0.018 | 11.4 | 0.4552 | 119 | 2.03 | 1.11 |
| 149.6 | 0.57 | 3 | -0.0796 | 0.177 | 3.72 | -- | -- | 0.000912 | 11.9 | 0.1589 | 131 | 1.84 | 1.48 |
| 142.11 | 0.555 | 3 | -0.154 | -- | 1.67 | -- | -17.7 | -0.0196 | -- | 0.4622 | 119 | 2.02 | 1.1 |
| 168.72 | 0.609 | 3 | -0.0929 | 0.149 | -- | -0.0331 | -- | -0.0129 | 9.93 | -- | -- | -- | -- |
| 168.73 | 0.608 | 3 | -0.0943 | 0.149 | -- | -- | -- | -0.0131 | 9.83 | -- | -- | -- | -- |
| 151.54 | 0.573 | 3 | -0.0849 | -- | 3.61 | -- | -- | -0.00209 | -- | 0.1494 | 130 | 1.84 | 1.48 |
| 149.76 | 0.57 | 3 | -- | 0.178 | 3.73 | -- | -- | 0.00962 | 12 | 0.1377 | 131 | 1.84 | 1.48 |
| 170.06 | 0.609 | 3.01 | -0.0959 | -- | -- | -- | -- | -0.013 | -- | -- | -- | -- | -- |
| 168.96 | 0.608 | 3 | -- | 0.149 | -- | -- | -- | -0.00259 | 9.87 | -- | -- | -- | -- |
| 151.74 | 0.574 | 3 | -- | -- | 3.62 | -- | -- | 0.00751 | -- | 0.1775 | 131 | 1.84 | 1.49 |
| 170.3 | 0.609 | 3 | -- | -- | -- | -- | -- | -0.00238 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.07 | wind | 1.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 2 | 152.68 | wind | 1.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 3 | 153.30 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 6 | 153.31 | wind | 7.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 9 | 153.87 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 12 | 4 |
| 10 | 153.93 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 15 | 154.62 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 5 | 6 |
| 18 | 154.62 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 5 | 6 |
| 24 | 155.20 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 6 | 1 |
| 25 | 155.20 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 26 | 155.30 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 10 | 7 |
| 28 | 155.36 | temperature | 20.0 | 90 | < th | dose independent | rect. | 12 | 4 |
| 29 | 155.50 | humidity | 90.0 | 720 | > th | dose independent | rect. | 10 | 1 |
| 32 | 155.59 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 10 | 1 |
| 36 | 155.82 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 9 | 2 |
| 38 | 155.82 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 9 | 2 |
| 40 | 156.19 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 7 | 4 |
| 43 | 156.19 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 72 | 157.01 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 73 | 157.01 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 102 | 158.11 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 14 | 2 |
| 105 | 158.13 | temperature | 20.0 | 90 | < th | dose independent | rect. | 14 | 2 |
| 109 | 158.16 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 129 | 158.25 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 10 | 3 |
| 174 | 158.81 | radiation | 1.0 | 30 | < th | dose independent | rect. | 7 | 7 |
| 185 | 158.84 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 7 | 7 |
| 195 | 158.90 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 2 |
| 204 | 159.05 | radiation | 1.0 | 30 | < th | dose independent | rect. | 7 | 5 |
| 211 | 159.12 | radiation | 1.0 | 90 | < th | dose independent | rect. | 7 | 3 |
| 259 | 159.22 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 3 |
| 275 | 159.22 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 298 | 159.24 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 3 |
| 336 | 159.48 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 352 | 159.58 | wind | 1.0 | 90 | < th | dose dependent | rect. | 10 | 2 |
| 362 | 159.64 | wind | 1.0 | 90 | < th | dose independent | rect. | 11 | 1 |
| 399 | 160.03 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 9 | 7 |
| 409 | 160.08 | wind | 9.0 | 10 | > th | dose dependent | rect. | 18 | 18 |
| 427 | 160.14 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 434 | 160.19 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 1 |
| 471 | 160.19 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 524 | 160.41 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 10 |
| 535 | 160.44 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 10 | 11 |
| 554 | 160.55 | wind | 3.0 | 90 | < th | dose dependent | rect. | 9 | 11 |
| 562 | 160.60 | temperature | 20.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 634 | 161.02 | temperature | 20.0 | 720 | < th | dose independent | rect. | 4 | 7 |
| 648 | 161.08 | wind | 9.0 | 90 | > th | dose dependent | rect. | 11 | 1 |
| 658 | 161.11 | wind | 9.0 | 90 | > th | dose independent | rect. | 11 | 1 |
| 671 | 161.16 | wind | 9.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 673 | 161.16 | wind | 9.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 679 | 161.18 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 10 | 7 |
| 680 | 161.18 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 687 | 161.21 | temperature | 25.0 | 90 | < th | dose dependent | sin | 22 | NA |
| 693 | 161.21 | wind | 9.0 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 722 | 161.25 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 11 |
| 725 | 161.26 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 22 |
| 759 | 161.27 | wind | 1.0 | 90 | < th | dose dependent | rect. | 17 | 11 |
| 819 | 161.44 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 16 | 15 |
| 821 | 161.45 | wind | 7.0 | 30 | < th | dose independent | rect. | 5 | 10 |
| 845 | 161.48 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 864 | 161.50 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 871 | 161.50 | wind | 9.0 | 90 | > th | dose dependent | rect. | 21 | 15 |
| 880 | 161.52 | temperature | 30.0 | 10 | < th | dose dependent | sin | 21 | NA |
| 921 | 161.59 | temperature | 20.0 | 720 | < th | dose independent | sin | 4 | NA |
| 939 | 161.62 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 5 |
| 956 | 161.64 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 998 | 161.67 | radiation | 1.0 | 270 | < th | dose independent | rect. | 10 | 5 |