Os01g0589700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0589700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.25 | 0.241 | 9.91 | 0.0101 | 0.83 | 0.768 | -0.344 | -1.2 | 0.0613 | 3.5 | 9.49 | 1334 | -- | -- |
| 27.11 | 0.242 | 9.88 | 0.217 | 0.84 | 0.701 | -0.425 | -- | 0.124 | 3.47 | 9.802 | 2891 | -- | -- |
| 26.53 | 0.24 | 9.91 | -0.0119 | 0.813 | 0.778 | -- | -1.4 | 0.0565 | 3.68 | 10.97 | 1195 | -- | -- |
| 27.66 | 0.245 | 9.88 | 0.222 | 0.84 | 0.703 | -- | -- | 0.126 | 3.5 | 9.768 | 2920 | -- | -- |
| 61.79 | 0.366 | 9.92 | -0.0444 | -- | 1.05 | -- | -1.35 | 0.035 | -- | 9.742 | 1147 | -- | -- |
| 37 | 0.285 | 9.85 | 0.505 | 0.887 | -- | -0.412 | -- | 0.267 | 3.42 | -- | -- | -- | -- |
| 37.54 | 0.287 | 9.85 | 0.513 | 0.885 | -- | -- | -- | 0.269 | 3.44 | -- | -- | -- | -- |
| 63.55 | 0.371 | 9.9 | 0.237 | -- | 1.04 | -- | -- | 0.0631 | -- | 13.72 | 1194 | -- | -- |
| 28.71 | 0.25 | 9.89 | -- | 0.847 | 0.802 | -- | -- | 0.0909 | 3.51 | 13.6 | 3004 | -- | -- |
| 81.48 | 0.422 | 9.85 | 0.55 | -- | -- | -- | -- | 0.293 | -- | -- | -- | -- | -- |
| 44.47 | 0.312 | 9.86 | -- | 0.895 | -- | -- | -- | 0.212 | 3.44 | -- | -- | -- | -- |
| 64.6 | 0.374 | 9.9 | -- | -- | 1.14 | -- | -- | 0.0688 | -- | 14.13 | 1165 | -- | -- |
| 89.47 | 0.442 | 9.86 | -- | -- | -- | -- | -- | 0.232 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.72 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 2 | 25.75 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 3 | 25.77 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 4 | 25.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 12 | 25.84 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 18 |
| 19 | 25.95 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 22 | 25.99 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 36 | 26.08 | humidity | 60 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 37 | 26.08 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 42 | 26.09 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 9 |
| 73 | 26.13 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 101 | 26.15 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 8 |
| 158 | 26.21 | temperature | 10 | 1440 | > th | dose dependent | sin | 0 | NA |
| 187 | 26.23 | temperature | 15 | 720 | > th | dose dependent | sin | 20 | NA |
| 202 | 26.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 21 |
| 311 | 26.30 | humidity | 60 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 317 | 26.30 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 335 | 26.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 340 | 26.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 345 | 26.31 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 351 | 26.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 355 | 26.32 | humidity | 60 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 381 | 26.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 406 | 26.34 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 410 | 26.34 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 456 | 26.36 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 481 | 26.37 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 578 | 26.42 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 579 | 26.42 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 585 | 26.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 11 |
| 637 | 26.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 680 | 26.47 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 3 |
| 703 | 26.48 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 706 | 26.48 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 707 | 26.48 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 708 | 26.48 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 754 | 26.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 19 |
| 820 | 26.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 17 |
| 895 | 26.58 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 907 | 26.59 | wind | 5 | 43200 | < th | dose independent | rect. | 4 | 21 |
| 930 | 26.60 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 21 |
| 931 | 26.60 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 22 |
| 951 | 26.61 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 21 |
| 953 | 26.61 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 21 |
| 954 | 26.61 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 22 |
| 980 | 26.62 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 982 | 26.62 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 23 |