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Os01g0589300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Single myb histone 1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0191) R2 : 0.0428
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.182 (0.0403) R2dN8 : 0.0553 R2N8 : 0.0428
σ : 0.36
deviance : 59.56
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.36 0.271 10.5 -0.459 0.315 0.716 -0.35 1.02 -0.136 2.73 26.4 88 -- --
34.57 0.274 10.4 -0.293 0.334 0.642 0.00695 -- -0.103 2.7 26.4 75 -- --
33.68 0.27 10.4 -0.411 0.32 0.699 -- 0.758 -0.122 2.71 26.37 81 -- --
34.57 0.274 10.4 -0.293 0.333 0.643 -- -- -0.102 2.73 26.4 75 -- --
37.54 0.285 10.4 -0.36 -- 0.918 -- 0.843 -0.0808 -- 28.25 53 -- --
40.52 0.298 10.5 -0.449 0.492 -- 0.0426 -- -0.242 2.63 -- -- -- --
40.53 0.298 10.5 -0.45 0.492 -- -- -- -0.242 2.64 -- -- -- --
38.59 0.291 10.4 -0.229 -- 0.883 -- -- -0.0552 -- 28.71 45 -- --
36.69 0.282 10.4 -- 0.305 0.746 -- -- -0.0836 2.73 26.41 73 -- --
54.7 0.346 10.5 -0.429 -- -- -- -- -0.23 -- -- -- -- --
45.87 0.317 10.5 -- 0.484 -- -- -- -0.192 2.63 -- -- -- --
39.81 0.294 10.4 -- -- 0.962 -- -- -0.0122 -- 28.63 42 -- --
59.56 0.36 10.5 -- -- -- -- -- -0.182 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.06 radiation 10 10 > th dose dependent rect. 13 23
2 33.12 temperature 20 30 > th dose dependent rect. 20 8
3 33.20 radiation 40 270 < th dose dependent rect. 2 15
6 33.31 temperature 25 10 > th dose independent rect. 9 17
16 33.38 radiation 30 270 < th dose independent rect. 2 15
17 33.38 temperature 30 90 < th dose dependent rect. 15 18
25 33.46 temperature 25 90 < th dose dependent rect. 3 22
29 33.49 temperature 15 270 > th dose dependent rect. 18 8
36 33.54 temperature 30 90 < th dose dependent rect. 13 20
55 33.75 radiation 30 90 < th dose dependent sin 1 NA
57 33.76 radiation 20 90 < th dose independent rect. 4 14
63 33.77 radiation 1 270 > th dose dependent rect. 15 21
64 33.78 radiation 1 270 > th dose dependent rect. 7 5
74 33.83 radiation 40 10 < th dose dependent sin 0 NA
87 33.86 radiation 10 10 > th dose dependent rect. 15 21
100 33.90 temperature 30 30 < th dose dependent rect. 21 23
124 33.95 radiation 40 10 < th dose dependent rect. 4 14
125 33.95 temperature 30 10 < th dose dependent rect. 12 22
161 34.03 temperature 15 10 > th dose dependent rect. 8 20
168 34.05 radiation 10 10 > th dose dependent rect. 8 4
181 34.06 temperature 30 10 < th dose dependent rect. 3 23
182 34.07 radiation 30 10 > th dose independent rect. 11 1
185 34.07 radiation 40 10 < th dose independent rect. 4 16
190 34.08 radiation 10 10 > th dose dependent rect. 11 1
198 34.09 radiation 1 90 > th dose dependent sin 2 NA
206 34.10 radiation 30 270 < th dose dependent sin 4 NA
241 34.13 temperature 20 90 > th dose dependent rect. 20 16
246 34.13 temperature 25 90 < th dose dependent rect. 9 23
248 34.14 temperature 25 90 < th dose dependent no NA NA
252 34.14 temperature 25 90 < th dose dependent rect. 19 23
259 34.15 temperature 30 10 < th dose dependent rect. 23 23
263 34.16 radiation 1 270 > th dose dependent sin 6 NA
274 34.17 temperature 25 90 < th dose dependent rect. 15 23
275 34.18 radiation 40 10 > th dose independent rect. 13 23
281 34.19 humidity 60 90 > th dose independent rect. 4 15
282 34.19 radiation 1 90 > th dose dependent rect. 7 9
294 34.21 radiation 40 10 < th dose dependent rect. 4 16
306 34.24 temperature 25 270 < th dose independent rect. 11 20
318 34.26 temperature 25 270 < th dose independent rect. 13 18
334 34.28 radiation 1 90 > th dose dependent rect. 7 11
351 34.29 radiation 1 10 > th dose dependent rect. 8 10
434 34.34 temperature 25 90 < th dose dependent rect. 7 23
435 34.34 radiation 1 90 > th dose dependent rect. 17 23
445 34.36 radiation 20 90 < th dose independent sin 1 NA
478 34.38 temperature 20 10 > th dose dependent rect. 20 20
608 34.46 temperature 30 10 < th dose dependent no NA NA
614 34.46 temperature 30 10 < th dose dependent rect. 15 23
632 34.47 temperature 15 90 > th dose dependent rect. 17 23
685 34.53 temperature 20 270 > th dose dependent rect. 18 18
693 34.54 radiation 1 10 > th dose dependent sin 0 NA
736 34.55 radiation 1 90 > th dose dependent no NA NA
809 34.55 radiation 40 10 < th dose dependent rect. 21 23