Os01g0588000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HSP20-like chaperone domain containing protein.
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Os01g0588000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HSP20-like chaperone domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 532.42 | 1.08 | 5.54 | -5.99 | 0.878 | 2.2 | 0.0336 | -6.73 | -0.952 | 6.19 | 19.6 | 8584 | -- | -- |
| 550.12 | 1.09 | 5.33 | -4.99 | 0.876 | 3.26 | -0.0183 | -- | -0.774 | 6.21 | 11.9 | 14300 | -- | -- |
| 527.85 | 1.07 | 5.59 | -6.1 | 0.884 | 2.31 | -- | -6.7 | -1.06 | 6.03 | 19.71 | 11520 | -- | -- |
| 550.12 | 1.09 | 5.33 | -4.98 | 0.878 | 3.25 | -- | -- | -0.769 | 6.2 | 11.93 | 14300 | -- | -- |
| 564.83 | 1.11 | 5.65 | -6.22 | -- | 2.38 | -- | -6.37 | -1.2 | -- | 19.2 | 12866 | -- | -- |
| 709.3 | 1.25 | 5.03 | -2.63 | 0.923 | -- | 0.0849 | -- | 0.535 | 5.87 | -- | -- | -- | -- |
| 709.31 | 1.25 | 5.03 | -2.63 | 0.924 | -- | -- | -- | 0.535 | 5.89 | -- | -- | -- | -- |
| 590.08 | 1.13 | 5.35 | -4.97 | -- | 3.28 | -- | -- | -0.765 | -- | 11.9 | 14288 | -- | -- |
| 860.69 | 1.37 | 4.96 | -- | 0.815 | 0.823 | -- | -- | 0.947 | 5.62 | 28.3 | 1402 | -- | -- |
| 753.55 | 1.28 | 5.05 | -2.6 | -- | -- | -- | -- | 0.557 | -- | -- | -- | -- | -- |
| 891.13 | 1.4 | 4.97 | -- | 0.884 | -- | -- | -- | 0.828 | 6.03 | -- | -- | -- | -- |
| 894.41 | 1.39 | 4.96 | -- | -- | 0.845 | -- | -- | 0.925 | -- | 27.8 | 1319 | -- | -- |
| 931.68 | 1.42 | 4.98 | -- | -- | -- | -- | -- | 0.845 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 493.46 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 2 | 495.09 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 3 | 495.09 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 4 | 495.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 13 |
| 6 | 495.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 2 |
| 10 | 496.49 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 12 |
| 11 | 496.65 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 13 |
| 12 | 496.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 13 |
| 13 | 496.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 13 |
| 14 | 497.00 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 9 |
| 18 | 497.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 9 |
| 19 | 498.33 | temperature | 25.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 20 | 498.39 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 21 | 498.39 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 22 | 498.60 | temperature | 25.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 23 | 498.82 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 21 | 16 |
| 26 | 498.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 32 | 499.08 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 21 | 16 |
| 35 | 499.24 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 36 | 499.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 44 | 499.46 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 12 |
| 45 | 499.46 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 12 |
| 47 | 499.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 54 | 499.69 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 55 | 499.75 | temperature | 25.0 | 43200 | > th | dose independent | sin | 13 | NA |
| 56 | 499.76 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 58 | 499.76 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 74 | 500.12 | temperature | 25.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 86 | 500.33 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 14 | 18 |
| 97 | 500.45 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 6 | NA |
| 118 | 500.62 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 14 | 10 |
| 122 | 500.64 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 6 | NA |
| 125 | 500.65 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 6 | NA |
| 126 | 500.65 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 6 | NA |
| 172 | 500.98 | temperature | 25.0 | 43200 | > th | dose dependent | sin | 15 | NA |
| 236 | 501.42 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 244 | 501.44 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 18 | 22 |
| 247 | 501.47 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 7 |
| 275 | 501.63 | temperature | 25.0 | 43200 | > th | dose dependent | no | NA | NA |
| 276 | 501.63 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 2 | 22 |
| 321 | 501.73 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 21 | 23 |
| 329 | 501.77 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 330 | 501.77 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 336 | 501.78 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 389 | 501.96 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 419 | 502.06 | temperature | 25.0 | 43200 | > th | dose dependent | sin | 6 | NA |
| 454 | 502.21 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 473 | 502.27 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 494 | 502.37 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 648 | 503.06 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 775 | 503.71 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 826 | 504.10 | temperature | 25.0 | 43200 | > th | dose independent | no | NA | NA |
| 842 | 504.24 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 843 | 504.24 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 848 | 504.26 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 877 | 504.55 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 4 | 23 |
| 881 | 504.58 | temperature | 25.0 | 43200 | < th | dose independent | no | NA | NA |
| 885 | 504.60 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 898 | 504.67 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 903 | 504.69 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 1 | 23 |
| 943 | 505.02 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 3 | 23 |
| 967 | 505.21 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 984 | 505.24 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 988 | 505.25 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 14 | 8 |