Os01g0587500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HSP20-like chaperone domain containing protein.
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Os01g0587500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HSP20-like chaperone domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 409.99 | 0.951 | 7.84 | -6.29 | 0.514 | 2.39 | -0.119 | -10.2 | -0.627 | 7.13 | 24.58 | 1288 | -- | -- |
| 426.8 | 0.962 | 7.63 | -4.38 | 0.588 | 2.3 | 0.0597 | -- | -0.441 | 5.8 | 11.17 | 9182 | -- | -- |
| 410 | 0.943 | 7.84 | -6.29 | 0.506 | 2.4 | -- | -10.3 | -0.615 | 7.1 | 24.7 | 1287 | -- | -- |
| 426.49 | 0.962 | 7.63 | -4.42 | 0.572 | 2.4 | -- | -- | -0.448 | 5.78 | 10.51 | 8968 | -- | -- |
| 423.62 | 0.959 | 7.84 | -6.2 | -- | 2.35 | -- | -9.61 | -0.625 | -- | 24.29 | 1305 | -- | -- |
| 518.17 | 1.07 | 7.47 | -3.13 | 0.593 | -- | 0.0246 | -- | 0.271 | 5.45 | -- | -- | -- | -- |
| 518.17 | 1.07 | 7.47 | -3.13 | 0.593 | -- | -- | -- | 0.271 | 5.45 | -- | -- | -- | -- |
| 441.14 | 0.978 | 7.64 | -4.4 | -- | 2.4 | -- | -- | -0.428 | -- | 10.41 | 8567 | -- | -- |
| 760.71 | 1.28 | 7.4 | -- | 0.512 | 0.554 | -- | -- | 0.568 | 5.4 | 28.38 | 6988 | -- | -- |
| 536.48 | 1.08 | 7.48 | -3.11 | -- | -- | -- | -- | 0.285 | -- | -- | -- | -- | -- |
| 776.99 | 1.3 | 7.39 | -- | 0.542 | -- | -- | -- | 0.62 | 5.69 | -- | -- | -- | -- |
| 772.53 | 1.29 | 7.37 | -- | -- | 0.649 | -- | -- | 0.744 | -- | 33.7 | 1091 | -- | -- |
| 792.25 | 1.31 | 7.4 | -- | -- | -- | -- | -- | 0.631 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 369.06 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 3 | 369.13 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 6 | 5 |
| 7 | 369.20 | temperature | 25.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 9 | 369.21 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 22 | 14 |
| 32 | 369.60 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 11 | 5 |
| 33 | 369.61 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 36 | 369.68 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 11 | 5 |
| 39 | 369.74 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 59 | 369.98 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 2 | 14 |
| 63 | 369.99 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 5 | 11 |
| 77 | 370.01 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 15 | 20 |
| 115 | 370.21 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 11 | 20 |
| 120 | 370.22 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 11 | 11 |
| 180 | 370.33 | temperature | 25.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 238 | 370.44 | temperature | 30.0 | 43200 | < th | dose independent | sin | 21 | NA |
| 338 | 370.66 | temperature | 30.0 | 43200 | > th | dose independent | sin | 20 | NA |
| 413 | 370.79 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 4 | 18 |
| 419 | 370.79 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 422 | 370.79 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 425 | 370.80 | temperature | 30.0 | 43200 | < th | dose independent | no | NA | NA |
| 519 | 370.90 | temperature | 25.0 | 43200 | > th | dose dependent | no | NA | NA |
| 538 | 370.92 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 5 | 23 |
| 592 | 371.01 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 608 | 371.05 | temperature | 30.0 | 43200 | > th | dose independent | no | NA | NA |
| 745 | 371.11 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 748 | 371.12 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 2 |
| 756 | 371.16 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 806 | 371.33 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 818 | 371.40 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 824 | 371.41 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 23 | 11 |
| 842 | 371.50 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 856 | 371.54 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 23 | 11 |
| 861 | 371.57 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 935 | 371.92 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 936 | 371.92 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 3 |