Os01g0574600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Gamma hydroxybutyrate dehydrogenase (EC 1.1.1.61).
FiT-DB / Search/ Help/ Sample detail
|
Os01g0574600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Gamma hydroxybutyrate dehydrogenase (EC 1.1.1.61).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 225.54 | 0.706 | 7.69 | -0.943 | 0.276 | -0.682 | -0.0474 | -6.89 | -0.814 | 23.8 | 29.72 | 1790 | -- | -- |
| 230.19 | 0.707 | 7.87 | -2.18 | 0.252 | -1.36 | -0.108 | -- | -1.03 | 23.5 | 29.24 | 4826 | -- | -- |
| 224.36 | 0.698 | 7.7 | -0.886 | 0.218 | -0.744 | -- | -6.73 | -0.816 | 0.237 | 29.5 | 2100 | -- | -- |
| 227.8 | 0.703 | 7.87 | -2.15 | 0.213 | -1.34 | -- | -- | -1.1 | 23.8 | 28.9 | 4837 | -- | -- |
| 226.98 | 0.702 | 7.71 | -0.841 | -- | -0.819 | -- | -6.53 | -0.835 | -- | 29.5 | 2115 | -- | -- |
| 297.95 | 0.809 | 7.86 | -1.79 | 0.349 | -- | 0.255 | -- | -1.06 | 22.6 | -- | -- | -- | -- |
| 298.17 | 0.809 | 7.86 | -1.81 | 0.348 | -- | -- | -- | -1.06 | 23 | -- | -- | -- | -- |
| 231.76 | 0.709 | 7.86 | -2.21 | -- | -1.42 | -- | -- | -1.13 | -- | 28.8 | 4863 | -- | -- |
| 349.63 | 0.871 | 7.82 | -- | 0.276 | -0.945 | -- | -- | -0.878 | 23.1 | 29 | 4822 | -- | -- |
| 305.68 | 0.817 | 7.85 | -1.8 | -- | -- | -- | -- | -1.06 | -- | -- | -- | -- | -- |
| 384.05 | 0.917 | 7.82 | -- | 0.334 | -- | -- | -- | -0.864 | 22.6 | -- | -- | -- | -- |
| 353.65 | 0.876 | 7.79 | -- | -- | -0.975 | -- | -- | -0.803 | -- | 29.3 | 4945 | -- | -- |
| 390.9 | 0.923 | 7.81 | -- | -- | -- | -- | -- | -0.863 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 210.53 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 6 | 212.46 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 7 | 212.46 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 9 | 212.75 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 11 | 213.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 15 | 214.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 10 |
| 16 | 214.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 10 |
| 17 | 214.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 10 |
| 67 | 214.94 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 18 | NA |
| 69 | 214.94 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 17 |
| 70 | 214.94 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 18 | NA |
| 71 | 214.94 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 17 |
| 72 | 214.95 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 18 | NA |
| 78 | 215.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 17 |
| 211 | 215.99 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 305 | 217.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 18 |
| 308 | 217.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 16 |
| 324 | 217.21 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 387 | 217.98 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 23 | NA |
| 410 | 218.17 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 17 | NA |
| 412 | 218.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 22 |
| 473 | 218.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 486 | 218.75 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 616 | 219.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 619 | 219.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 12 |
| 622 | 219.72 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 656 | 219.93 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 16 |
| 726 | 220.41 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 785 | 220.79 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 819 | 221.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 23 |
| 820 | 221.03 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 822 | 221.03 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 23 |
| 885 | 221.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 887 | 221.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 914 | 221.67 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 915 | 221.67 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 917 | 221.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 918 | 221.67 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |
| 919 | 221.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 23 |
| 923 | 221.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 23 |