BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0574600 Os01g0574600|AK064876
(341 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G17650.1 | chr1:6069594-6071964 REVERSE LENGTH=359 429 e-120
AT3G25530.1 | chr3:9271949-9273514 REVERSE LENGTH=290 298 4e-81
AT4G29120.1 | chr4:14350861-14351865 FORWARD LENGTH=335 142 2e-34
AT4G20930.1 | chr4:11198627-11201036 REVERSE LENGTH=348 117 1e-26
AT1G71170.1 | chr1:26830673-26831572 FORWARD LENGTH=300 94 1e-19
AT1G71180.1 | chr1:26832335-26833291 FORWARD LENGTH=319 88 7e-18
AT1G18270.3 | chr1:6283634-6293772 REVERSE LENGTH=1394 76 2e-14
>AT1G17650.1 | chr1:6069594-6071964 REVERSE LENGTH=359
Length = 358
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/284 (72%), Positives = 238/284 (83%)
Query: 53 VGFLGLGIMGAPMASNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTFA 112
+GFLG+GIMG+PMA NLI AGCDVTVWNRT+SKCDPL+ LGAKY+ SP +V ++CD+TFA
Sbjct: 69 IGFLGMGIMGSPMAQNLIKAGCDVTVWNRTKSKCDPLVGLGAKYKSSPEEVTATCDLTFA 128
Query: 113 MLADPESAVEVACGANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGASFLEAPVSG 172
MLADPESA++VACG NGA G++ GKGYVDVSTVD A+S LI K I TGA FLEAPVSG
Sbjct: 129 MLADPESAIDVACGKNGAIFGISSGKGYVDVSTVDVASSILISKQIKDTGALFLEAPVSG 188
Query: 173 SKKPAEDGLLIFLTAGDESLYNRVASLLDVMGKSRFFLGDVGKGADMKLXXXXXXXXXXX 232
SKKPAEDG LIFLTAGD+ LY + A LD+MGKS+F+LG+VG GA MKL
Sbjct: 189 SKKPAEDGQLIFLTAGDKPLYEKAAPFLDIMGKSKFYLGEVGNGAAMKLVVNMIMGSMMA 248
Query: 233 XXXEGLLLSEKVGLDPNTLVEVISQGAISAPMFSLKGPSMVKAAYPTAFPLKHQQKDLRL 292
EG+LLS+KVGLDPN LVEV+SQGAI+APM+SLKGPSM+K+ YPTAFPLKHQQKD+RL
Sbjct: 249 SFAEGILLSQKVGLDPNVLVEVVSQGAINAPMYSLKGPSMIKSVYPTAFPLKHQQKDMRL 308
Query: 293 ALALAESVSQSIPTVAAANELYKVAKSLGLADQDFSAVIEALKA 336
AL LAESVSQS P AAANELYKVAKS GL+D+DFSAVIEALKA
Sbjct: 309 ALGLAESVSQSTPIAAAANELYKVAKSYGLSDEDFSAVIEALKA 352
>AT3G25530.1 | chr3:9271949-9273514 REVERSE LENGTH=290
Length = 289
Score = 298 bits (762), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 154/284 (54%), Positives = 192/284 (67%)
Query: 52 KVGFLGLGIMGAPMASNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTF 111
+VGFLGLGIMG M+ NL+ G VTVWNRT SKCD L+ GA SPA+V C T
Sbjct: 2 EVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTI 61
Query: 112 AMLADPESAVEVACGANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGASFLEAPVS 171
AML+DP +A+ V G + + GKGY+D+STVDA TS I + IT G F+E PVS
Sbjct: 62 AMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVS 121
Query: 172 GSKKPAEDGLLIFLTAGDESLYNRVASLLDVMGKSRFFLGDVGKGADMKLXXXXXXXXXX 231
GSKKPAEDG LI L AGD++L+ DV+GK F+LG VG GA MKL
Sbjct: 122 GSKKPAEDGQLIILAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMM 181
Query: 232 XXXXEGLLLSEKVGLDPNTLVEVISQGAISAPMFSLKGPSMVKAAYPTAFPLKHQQKDLR 291
EGL+L++K GL +TL++++ GA++ PMF KGPSM K++YP AFPLKHQQKD+R
Sbjct: 182 NAFSEGLVLADKSGLSSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPPAFPLKHQQKDMR 241
Query: 292 LALALAESVSQSIPTVAAANELYKVAKSLGLADQDFSAVIEALK 335
LALAL + + S+P AAANE +K A+SLGL D DFSAVIEA+K
Sbjct: 242 LALALGDENAVSMPVAAAANEAFKKARSLGLGDLDFSAVIEAVK 285
>AT4G29120.1 | chr4:14350861-14351865 FORWARD LENGTH=335
Length = 334
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 141/285 (49%), Gaps = 2/285 (0%)
Query: 52 KVGFLGLGIMGAPMASNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTF 111
K+G++G G+MG M +LI AG VTV+NRT SK L+ +GA SP VA DV F
Sbjct: 39 KIGWIGTGVMGRSMCGHLIKAGYTVTVFNRTISKAQTLIDMGANVADSPNSVAEQSDVVF 98
Query: 112 AMLADPESAVEVACG-ANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGASFLEAPV 170
++ P V +GA G+ G VD++T + + ++ I K + ++APV
Sbjct: 99 TIVGYPSDVRHVLLDPKSGALSGLRQGGVLVDMTTSEPSLAEEIAKAASFKNCFSIDAPV 158
Query: 171 SGSKKPAEDGLLIFLTAGDESLYNRVASLLDVMGKSRFFLGDVGKGADMKLXXXXXXXXX 230
SG A++G L GDE+ R+ L +MGK F+G GKG KL
Sbjct: 159 SGGDLGAKNGKLSIFAGGDETTVKRLDPLFSLMGKVN-FMGTSGKGQFAKLANQITIAST 217
Query: 231 XXXXXEGLLLSEKVGLDPNTLVEVISQGAISAPMFSLKGPSMVKAAYPTAFPLKHQQKDL 290
EGL+ + K GLD +E IS GA + L G ++K + F + H KDL
Sbjct: 218 MLGLVEGLIYAHKAGLDVKKFLEAISTGAAGSKSIDLYGDRILKRDFDPGFYVNHFVKDL 277
Query: 291 RLALALAESVSQSIPTVAAANELYKVAKSLGLADQDFSAVIEALK 335
+ L + + ++P +A A +LY K+ G D A++ AL+
Sbjct: 278 GICLNECQRMGLALPGLALAQQLYLSLKAHGEGDLGTQALLLALE 322
>AT4G20930.1 | chr4:11198627-11201036 REVERSE LENGTH=348
Length = 347
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 130/302 (43%), Gaps = 21/302 (6%)
Query: 53 VGFLGLGIMGAPMASNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTFA 112
VGF+GLG MG M +NLI AG VTV + R +G +P +VA +V
Sbjct: 40 VGFIGLGNMGFRMVNNLIRAGYKVTVHDINRDVMKMFTEMGVSSRETPYEVAQDSEVVIT 99
Query: 113 MLADPESAVEVACGANGAAQG---MAPGKGYVDVSTVDAATSKLIGKHITSTGAS----- 164
ML ++V G NG G + P ++D ST+D T++ I +++
Sbjct: 100 MLPSSSHVMDVYTGTNGLLLGENDIRPAL-FIDSSTIDPQTTRKISLAVSNCNLKEKRDN 158
Query: 165 -----FLEAPVSGSKKPAEDGLLIFLTAGDESLYNRVASLLDVMGKSRFFLGDVGKGADM 219
L+APVSG AE G L F+ G E Y +L MG++ + G G G+
Sbjct: 159 WEKPVMLDAPVSGGVLAAEAGTLTFMVGGPEDAYLAARPILQSMGRTSIYCGGSGNGSAA 218
Query: 220 KLXXXXXXXXXXXXXXEGLLLSEKVGLDPNTLVEVI--SQGAISAPMFSLKGPSMVKAA- 276
K+ E L L + +G+ +TL EV+ S G + P ++K
Sbjct: 219 KICNNLAMAVSMLGTSEALALGQSLGISASTLTEVLNTSSGRCWSSDAYNPVPGVMKGVP 278
Query: 277 ----YPTAFPLKHQQKDLRLALALAESVSQSIPTVAAANELYKVAKSLGLADQDFSAVIE 332
Y F K KDL LA A AE V P ++ A E+YK G +DFS V
Sbjct: 279 SSRDYNGGFASKLMAKDLNLAAASAEEVGHKSPLISKAQEIYKKMCEEGHETKDFSCVFR 338
Query: 333 AL 334
Sbjct: 339 HF 340
>AT1G71170.1 | chr1:26830673-26831572 FORWARD LENGTH=300
Length = 299
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 117/271 (43%), Gaps = 5/271 (1%)
Query: 65 MASNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTFAMLADPESAVEVA 124
M S+++ AG VTV+ R K L + G + SP ++ DV F ++ + +
Sbjct: 28 MVSHILAAGYSVTVYARDLRKTKDLQTKGGRTANSPKELGEMSDVVFTIVGNSNDVRSLL 87
Query: 125 CGANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGASFLEAPVSGSKKPAEDGLLIF 184
G +G G+ PG VD+++ ++ I ++APVSG A +G L
Sbjct: 88 LGDDGVLSGLKPGGVTVDMTSSKPGLAREIYAEARRRDCWAVDAPVSGGDAGAREGKLTI 147
Query: 185 LTAGDESLYNRVASLLDVMGKSRFFLGDVGKGADMKLXXXXXXXXXXXXXXEGLLLSEKV 244
GD + +A ++ MG R F+G G G K+ EG++ +EK
Sbjct: 148 FAGGDSEIVEWLAPVMKTMGIVR-FMGGAGSGQSCKIGNQICVGSNMIGLAEGIVFAEKA 206
Query: 245 GLDPNTLVEVISQGAISAPMFSLKGPSMVKAAYPTAFPLKHQQKDLRLALALAESVSQSI 304
GLDP +E + GA + + L G M Y ++ KD L +A + ++
Sbjct: 207 GLDPVKWLEAVKDGAAGSAVMRLFGEMMAVRDYKATGFAEYMVKD----LGMAAEAAMAM 262
Query: 305 PTVAAANELYKVAKSLGLADQDFSAVIEALK 335
P A +L+ V + G F V++ ++
Sbjct: 263 PGTALNKQLFTVMVANGDGKLGFQGVVDVIR 293
>AT1G71180.1 | chr1:26832335-26833291 FORWARD LENGTH=319
Length = 318
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 1/226 (0%)
Query: 65 MASNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTFAMLADPESAVEVA 124
M S++I AG VTV+ R K L + GA+ SP ++A DV F ++ + +
Sbjct: 49 MVSHIIAAGYSVTVYARDLRKTKDLQTKGARIANSPKELAEMSDVVFTIVGNFNDVRSLL 108
Query: 125 CGANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGASFLEAPVSGSKKPAEDGLLIF 184
G +G G+ PG VD+++ ++ I ++APVSG A +G L
Sbjct: 109 LGDDGVLSGLTPGGVTVDMTSSKPGLAREIHAEARRRNCWAVDAPVSGGDAGAREGTLGI 168
Query: 185 LTAGDESLYNRVASLLDVMGKSRFFLGDVGKGADMKLXXXXXXXXXXXXXXEGLLLSEKV 244
GD + ++ ++ +G + ++G+ G G K+ EG++ +EK
Sbjct: 169 FAGGDSEIVEWLSPVMKNIG-TVTYMGEAGSGQSCKIGNQIAGASNLVGLAEGIVFAEKA 227
Query: 245 GLDPNTLVEVISQGAISAPMFSLKGPSMVKAAYPTAFPLKHQQKDL 290
GLD +E + GA + + L G +VK Y ++ KDL
Sbjct: 228 GLDTVKWLEAVKDGAAGSAVMRLFGEMIVKRDYRATGFAEYMVKDL 273
>AT1G18270.3 | chr1:6283634-6293772 REVERSE LENGTH=1394
Length = 1393
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 7/286 (2%)
Query: 52 KVGFLGLGIMGAPMASNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTF 111
++GF+GLG MG MA++L+ + V ++ + + G SPA+V DV
Sbjct: 323 RIGFIGLGAMGFGMAAHLLKSNFSVCGYDVYKPTLVRFENAGGLAANSPAEVTKDVDVLV 382
Query: 112 AMLADPESAVEVACGANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGA--SFLEAP 169
M+ + A +V G GA + + G V STV A + + + + G ++AP
Sbjct: 383 IMVTNEVQAEDVLYGHLGAVEAIPSGATVVLASTVSPAFVSQLERRLENEGKDLKLVDAP 442
Query: 170 VSGSKKPAEDGLLIFLTAGDESLYNRVASLLDVMGKSRFFL-GDVGKGADMKLXXXXXXX 228
VSG K A G L + +G + +L + + + + G G G+ +K+
Sbjct: 443 VSGGVKRAAMGELTIMASGTDEALKSAGLVLSALSEKLYVIKGGCGAGSGVKMVNQLLAG 502
Query: 229 XXXXXXXEGLLLSEKVGLDPNTLVEVISQGAISAPMFSLKGPSMVKAAYPTAFPLKHQQK 288
E + ++GL+ L VIS ++ MF + P M+ Y L K
Sbjct: 503 VHIASAAEAMAFGARLGLNTRKLFNVISNSGGTSWMFENRVPHMLDNDYTPYSALDIFVK 562
Query: 289 DLRLALALAESVSQSIP--TVAAANELYKVAKSLGLADQDFSAVIE 332
D L + E S+ +P A++L+ + G D + V++
Sbjct: 563 D--LGIVTREGSSRKVPLHISTVAHQLFLAGSAAGWGRIDDAGVVK 606
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 112/263 (42%), Gaps = 4/263 (1%)
Query: 53 VGFLGLGIMGAPMASNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTFA 112
VGF+GL +AS+L+ +G V + + + + LG SPADV +
Sbjct: 5 VGFVGLDSFSFELASSLLRSGFKVQAFEISTELVEKFIELGGHKCDSPADVGKAAAAVVV 64
Query: 113 MLADPESAVEVACGANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGASF--LEAPV 170
+L+ P+ +V G G +G+ + ST+ + + K +T ++A V
Sbjct: 65 VLSHPDQIQDVIFGDEGVMKGLQKDAVLLLSSTISTLQLQKLEKQLTEKREQIFVVDAYV 124
Query: 171 SGSKKPAEDGLLIFLTAGDESLYNRVASLLDVMGKSRF-FLGDVGKGADMKLXXXXXXXX 229
DG L+ + +G R L M ++ + F G++G G+ +K+
Sbjct: 125 LKGMSELLDGKLMIIASGRSDSITRAQPYLTAMCQNLYTFEGEIGAGSKVKMVNELLEGI 184
Query: 230 XXXXXXEGLLLSEKVGLDPNTLVEVISQGAISAPMFSLKGPSMVKAAYPTAFPLKHQQKD 289
E + L + G+ P L ++IS A ++ ++ P ++K F L ++
Sbjct: 185 HLVAAVEAISLGSQAGVHPWILYDIISNAAGNSWIYKNHIPLLLKDDIEGRF-LDVLSQN 243
Query: 290 LRLALALAESVSQSIPTVAAANE 312
L + A+S+ +P +A A +
Sbjct: 244 LAIVEDKAKSLPFPVPLLAVARQ 266
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.131 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,297,260
Number of extensions: 193584
Number of successful extensions: 500
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 491
Number of HSP's successfully gapped: 9
Length of query: 341
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 242
Effective length of database: 8,392,385
Effective search space: 2030957170
Effective search space used: 2030957170
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)