Os01g0551100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribonuclease III domain containing protein.
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Os01g0551100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribonuclease III domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.22 | 0.48 | 12 | 1.08 | 1.49 | -1.02 | -0.0117 | -0.199 | 1.29 | 1.58 | 69 | 1286 | -- | -- |
| 104.21 | 0.475 | 12 | 1.11 | 1.49 | -1.03 | -0.0303 | -- | 1.3 | 1.57 | 69 | 1271 | -- | -- |
| 104.15 | 0.475 | 12 | 1.09 | 1.49 | -1.02 | -- | -0.168 | 1.29 | 1.57 | 69 | 1274 | -- | -- |
| 104.21 | 0.475 | 12 | 1.1 | 1.5 | -1.03 | -- | -- | 1.3 | 1.56 | 69 | 1271 | -- | -- |
| 160.93 | 0.591 | 12 | 1.09 | -- | -0.938 | -- | 0.102 | 1.32 | -- | 77.72 | 86 | -- | -- |
| 143.78 | 0.562 | 12 | 0.874 | 1.29 | -- | -0.264 | -- | 1.21 | 1.6 | -- | -- | -- | -- |
| 144.05 | 0.562 | 12 | 0.882 | 1.29 | -- | -- | -- | 1.21 | 1.57 | -- | -- | -- | -- |
| 158.51 | 0.586 | 12 | 0.982 | -- | -0.933 | -- | -- | 1.19 | -- | 77.91 | 63 | -- | -- |
| 135.18 | 0.542 | 12 | -- | 1.49 | -0.868 | -- | -- | 1.1 | 1.55 | 68.75 | 1263 | -- | -- |
| 246.48 | 0.734 | 12 | 0.934 | -- | -- | -- | -- | 1.24 | -- | -- | -- | -- | -- |
| 164.57 | 0.6 | 12 | -- | 1.31 | -- | -- | -- | 1.11 | 1.6 | -- | -- | -- | -- |
| 183.76 | 0.631 | 12 | -- | -- | -0.926 | -- | -- | 1.09 | -- | 77.96 | 74 | -- | -- |
| 269.51 | 0.766 | 12 | -- | -- | -- | -- | -- | 1.14 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.97 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 2 | 98.25 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 6 | 98.66 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 13 | 99.21 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 22 | 99.62 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 12 |
| 23 | 99.62 | humidity | 70 | 1440 | > th | dose independent | rect. | 20 | 18 |
| 28 | 99.63 | humidity | 70 | 1440 | > th | dose independent | rect. | 22 | 16 |
| 42 | 100.01 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 70 | 100.56 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 72 | 100.62 | humidity | 70 | 1440 | < th | dose independent | rect. | 19 | 19 |
| 93 | 100.82 | humidity | 70 | 1440 | > th | dose independent | sin | 5 | NA |
| 134 | 101.22 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 137 | 101.29 | humidity | 60 | 1440 | > th | dose dependent | rect. | 4 | 10 |
| 151 | 101.49 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 14 |
| 173 | 101.79 | humidity | 80 | 1440 | < th | dose dependent | sin | 6 | NA |
| 362 | 103.29 | humidity | 50 | 1440 | > th | dose dependent | sin | 3 | NA |
| 579 | 104.97 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 790 | 106.24 | humidity | 70 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 819 | 106.29 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 913 | 106.35 | humidity | 70 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 988 | 106.73 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 993 | 106.75 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 15 |