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Os01g0534800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to PRLI-interacting factor K (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.8 (0.0154) R2 : 0.0311
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.124 (0.0324) R2dN8 : 0.0401 R2N8 : 0.0311
σ : 0.29
deviance : 38.6
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.94 0.22 12.7 0.402 0.383 0.372 0.435 0.0381 -0.00837 10.5 18.02 1686 -- --
21.9 0.218 12.7 0.404 0.385 0.369 0.441 -- -0.00305 10.4 16.27 1721 -- --
22.66 0.222 12.7 0.403 0.383 0.374 -- -0.00785 -0.0104 10.4 18.13 1720 -- --
22.65 0.222 12.7 0.418 0.381 0.381 -- -- -0.0104 10.4 18.13 1720 -- --
26.97 0.242 12.8 0.413 -- 0.353 -- 0.145 -0.0248 -- 34.74 1044 -- --
25.95 0.239 12.7 0.379 0.361 -- 0.46 -- -0.0811 10 -- -- -- --
26.74 0.242 12.7 0.396 0.362 -- -- -- -0.0808 9.74 -- -- -- --
25.29 0.234 12.7 0.465 -- 0.464 -- -- 0.0224 -- 30.01 1029 -- --
27.25 0.243 12.7 -- 0.383 0.38 -- -- -0.0156 10.5 19.17 1737 -- --
34.53 0.275 12.8 0.393 -- -- -- -- -0.0804 -- -- -- -- --
30.88 0.26 12.8 -- 0.361 -- -- -- -0.125 9.66 -- -- -- --
30.14 0.256 12.7 -- -- 0.491 -- -- -0.0671 -- 29.32 986 -- --
38.6 0.29 12.8 -- -- -- -- -- -0.124 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 22.02 wind 5.0 10 < th dose dependent rect. 6 5
3 22.02 radiation 40.0 720 < th dose dependent rect. 11 13
4 22.03 radiation 40.0 720 < th dose dependent rect. 13 11
9 22.10 wind 1.0 43200 > th dose independent rect. 1 4
12 22.12 wind 3.0 10 < th dose independent rect. 6 5
20 22.17 wind 1.0 43200 < th dose independent rect. 1 4
21 22.17 radiation 20.0 720 < th dose independent rect. 11 13
26 22.19 temperature 30.0 90 < th dose independent rect. 5 6
27 22.20 wind 1.0 43200 < th dose independent rect. 3 2
28 22.20 wind 3.0 270 < th dose independent rect. 5 2
30 22.21 humidity 50.0 90 > th dose independent rect. 11 18
36 22.25 humidity 90.0 10 < th dose independent rect. 4 7
44 22.29 radiation 1.0 90 > th dose independent sin 9 NA
45 22.29 radiation 1.0 90 < th dose independent sin 9 NA
46 22.30 radiation 40.0 90 < th dose independent rect. 5 6
47 22.30 radiation 10.0 720 < th dose independent rect. 14 10
48 22.30 radiation 30.0 720 < th dose independent rect. 13 11
57 22.33 temperature 30.0 10 < th dose independent rect. 6 5
58 22.33 radiation 30.0 720 < th dose independent rect. 13 19
59 22.33 radiation 20.0 1440 < th dose dependent rect. 9 1
60 22.35 wind 5.0 270 < th dose independent rect. 4 4
61 22.35 radiation 10.0 90 < th dose dependent sin 10 NA
65 22.36 precipitation 0.1 270 < th dose independent rect. 8 20
66 22.36 precipitation 0.1 270 < th dose dependent rect. 8 20
68 22.37 radiation 1.0 1440 > th dose dependent rect. 9 1
73 22.39 radiation 20.0 270 < th dose independent rect. 4 5
77 22.39 wind 1.0 43200 < th dose dependent rect. 2 3
80 22.40 wind 9.0 270 < th dose independent rect. 8 20
85 22.41 radiation 40.0 270 < th dose dependent rect. 4 6
90 22.42 wind 9.0 270 < th dose independent rect. 7 22
91 22.43 radiation 20.0 1440 > th dose independent rect. 9 3
94 22.43 precipitation 0.1 90 < th dose independent rect. 11 18
96 22.43 precipitation 0.1 90 < th dose dependent rect. 11 18
99 22.44 radiation 40.0 10 < th dose independent rect. 6 5
101 22.44 precipitation 0.1 270 < th dose independent rect. 7 22
102 22.44 radiation 20.0 720 < th dose dependent rect. 5 19
103 22.44 precipitation 0.1 270 < th dose dependent rect. 7 22
104 22.45 temperature 30.0 43200 > th dose independent rect. 18 1
124 22.45 temperature 10.0 270 > th dose dependent rect. 4 4
127 22.46 wind 1.0 270 > th dose independent rect. 4 4
141 22.48 wind 9.0 90 < th dose independent rect. 11 18
142 22.48 humidity 50.0 270 > th dose independent rect. 8 20
158 22.50 temperature 15.0 90 > th dose independent rect. 5 6
165 22.50 radiation 20.0 1440 < th dose dependent rect. 8 9
169 22.51 precipitation 0.1 270 < th dose independent rect. 4 4
171 22.51 radiation 20.0 720 > th dose independent rect. 9 7
173 22.51 precipitation 0.1 270 < th dose dependent rect. 4 4
178 22.52 temperature 25.0 10 > th dose independent rect. 4 7
196 22.53 temperature 30.0 43200 < th dose independent rect. 18 1
197 22.53 humidity 80.0 270 > th dose independent rect. 5 2
198 22.53 radiation 20.0 1440 < th dose independent rect. 9 3
201 22.53 temperature 30.0 43200 < th dose independent rect. 18 5
207 22.53 temperature 30.0 43200 < th dose independent rect. 18 14
209 22.53 wind 7.0 270 < th dose dependent rect. 5 2
234 22.55 temperature 10.0 270 > th dose independent rect. 4 4
236 22.55 temperature 30.0 270 < th dose independent rect. 4 4
237 22.55 humidity 50.0 270 > th dose independent rect. 4 4
239 22.55 atmosphere 995.0 270 > th dose independent rect. 4 4
240 22.55 atmosphere 1015.0 270 < th dose independent rect. 4 4
241 22.55 temperature 30.0 43200 < th dose independent rect. 18 12
245 22.55 temperature 10.0 270 > th dose independent rect. 8 20
252 22.56 radiation 1.0 270 > th dose independent rect. 5 2
267 22.56 precipitation 0.1 10 < th dose independent rect. 11 19
270 22.56 temperature 10.0 270 > th dose dependent rect. 5 2
272 22.56 precipitation 0.1 10 < th dose dependent rect. 11 19
276 22.57 wind 5.0 90 < th dose independent rect. 18 11
286 22.58 atmosphere 995.0 270 > th dose dependent rect. 4 4
288 22.58 wind 9.0 90 < th dose dependent rect. 18 11
290 22.59 radiation 20.0 270 < th dose independent rect. 5 2
294 22.59 wind 9.0 270 < th dose dependent rect. 4 4
295 22.59 atmosphere 995.0 10 > th dose dependent rect. 6 5
296 22.59 wind 9.0 90 < th dose dependent rect. 5 13
299 22.60 precipitation 0.1 270 < th dose independent rect. 5 2
306 22.60 precipitation 0.1 270 < th dose dependent rect. 5 2
314 22.61 temperature 10.0 270 > th dose independent rect. 5 2
316 22.61 temperature 30.0 270 < th dose independent rect. 5 2
317 22.61 humidity 50.0 270 > th dose independent rect. 5 2
319 22.61 atmosphere 995.0 270 > th dose independent rect. 5 2
320 22.61 atmosphere 1015.0 270 < th dose independent rect. 5 2
329 22.61 temperature 10.0 270 > th dose independent rect. 7 22
342 22.62 temperature 25.0 30 > th dose independent rect. 4 5
346 22.62 precipitation 0.1 90 < th dose independent rect. 5 6
363 22.62 precipitation 0.1 90 < th dose dependent rect. 5 6
377 22.62 radiation 40.0 720 < th dose dependent rect. 12 20
379 22.62 radiation 40.0 720 < th dose dependent rect. 20 21
386 22.63 atmosphere 995.0 270 > th dose dependent rect. 5 2
403 22.64 atmosphere 995.0 90 > th dose independent rect. 5 6
404 22.64 atmosphere 1015.0 90 < th dose independent rect. 5 6
407 22.64 temperature 10.0 90 > th dose independent rect. 11 18
409 22.64 radiation 1.0 14400 > th dose dependent rect. 13 1
427 22.65 radiation 40.0 14400 > th dose independent rect. 13 1
442 22.65 wind 1.0 270 > th dose independent rect. 8 20
445 22.65 radiation 30.0 720 < th dose dependent rect. 14 1
451 22.65 radiation 20.0 720 < th dose dependent rect. 20 21
453 22.66 radiation 20.0 14400 < th dose independent rect. 13 1
454 22.66 radiation 40.0 14400 < th dose independent rect. 13 1
455 22.66 humidity 90.0 10 < th dose independent rect. 6 3
465 22.66 radiation 40.0 720 < th dose dependent rect. 13 4
473 22.67 temperature 25.0 10 > th dose independent rect. 6 3
490 22.67 radiation 40.0 14400 < th dose dependent rect. 13 1
492 22.67 radiation 40.0 270 < th dose dependent rect. 5 2
501 22.68 radiation 20.0 1440 < th dose independent rect. 9 9
515 22.68 radiation 20.0 1440 < th dose dependent sin 22 NA
517 22.68 humidity 50.0 270 > th dose dependent rect. 5 2
518 22.68 radiation 1.0 1440 > th dose dependent rect. 9 3
534 22.69 radiation 1.0 30 > th dose independent rect. 17 18
545 22.69 radiation 30.0 1440 < th dose dependent rect. 9 5
568 22.70 temperature 15.0 10 > th dose dependent rect. 6 3
573 22.70 wind 7.0 10 < th dose dependent rect. 6 12
577 22.71 radiation 10.0 720 < th dose independent rect. 14 3
597 22.71 radiation 40.0 270 < th dose dependent rect. 4 11
617 22.72 radiation 10.0 43200 > th dose independent rect. 13 2
623 22.72 humidity 70.0 720 > th dose independent rect. 13 11
646 22.73 radiation 20.0 14400 < th dose independent rect. 11 3
654 22.73 humidity 50.0 270 > th dose independent rect. 7 22
685 22.74 wind 9.0 10 < th dose independent rect. 11 19
695 22.74 humidity 50.0 270 > th dose dependent rect. 4 4
709 22.75 temperature 25.0 43200 > th dose independent rect. 10 1
710 22.75 temperature 25.0 43200 < th dose independent rect. 10 1
721 22.75 radiation 40.0 10 < th dose dependent rect. 6 5
764 22.76 precipitation 0.1 10 < th dose independent rect. 9 21
771 22.76 radiation 1.0 1440 > th dose dependent rect. 9 8
774 22.76 precipitation 0.1 10 < th dose dependent rect. 9 21
783 22.77 radiation 20.0 720 < th dose independent rect. 20 21
786 22.77 radiation 20.0 14400 < th dose dependent rect. 10 4
808 22.77 radiation 40.0 1440 > th dose dependent rect. 14 20
817 22.77 radiation 20.0 1440 < th dose dependent rect. 13 23
831 22.78 humidity 60.0 10 > th dose independent rect. 6 5
837 22.78 humidity 70.0 720 > th dose independent rect. 12 20
840 22.78 radiation 20.0 1440 < th dose dependent no NA NA
916 22.79 precipitation 0.1 10 < th dose independent rect. 6 5
932 22.79 precipitation 0.1 10 < th dose dependent rect. 6 5
953 22.79 radiation 20.0 1440 < th dose dependent rect. 15 23
967 22.80 temperature 10.0 10 > th dose independent rect. 6 5
970 22.80 atmosphere 995.0 10 > th dose independent rect. 6 5
971 22.80 atmosphere 1015.0 10 < th dose independent rect. 6 5
973 22.80 precipitation 0.1 43200 < th dose independent rect. 9 8
975 22.80 temperature 10.0 10 > th dose independent rect. 11 19
986 22.80 precipitation 0.1 43200 < th dose dependent rect. 9 8