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Os01g0531300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.43 (0.0238) R2 : 0.372
β1 : -0.799 (0.0871) R2dD : 0.12 R2D : 0.122
β2 : 0.773 (0.0621) R2dC : 0.215 R2C : 0.206
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.195 (0.0508) R2dN8 : 0.0272 R2N8 : 0.0422
σ : 0.447
deviance : 91.22
__
_____
C
peak time of C : 6.37
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
85.5 0.434 8.43 -0.758 0.567 -0.56 -0.231 -0.536 0.204 7.18 26 216 -- --
85.46 0.431 8.43 -0.705 0.576 -0.62 -0.192 -- 0.208 7.18 26.4 203 -- --
85.54 0.431 8.43 -0.741 0.578 -0.567 -- -0.264 0.205 7.01 26.3 206 -- --
85.54 0.431 8.43 -0.714 0.582 -0.595 -- -- 0.209 7.05 26.4 203 -- --
97.43 0.46 8.43 -0.59 -- -0.966 -- 0.365 0.26 -- 25.7 355 -- --
90.95 0.447 8.43 -0.803 0.771 -- 0.346 -- 0.196 6.26 -- -- -- --
91.22 0.447 8.43 -0.799 0.773 -- -- -- 0.195 6.37 -- -- -- --
97.46 0.46 8.43 -0.64 -- -0.942 -- -- 0.252 -- 25.61 355 -- --
98.44 0.462 8.41 -- 0.524 -0.753 -- -- 0.295 7.45 26.1 200 -- --
122.22 0.517 8.44 -0.778 -- -- -- -- 0.211 -- -- -- -- --
108.02 0.486 8.41 -- 0.762 -- -- -- 0.284 6.42 -- -- -- --
107.99 0.484 8.42 -- -- -1.02 -- -- 0.343 -- 25.16 358 -- --
138.2 0.549 8.42 -- -- -- -- -- 0.298 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 81.54 wind 1 10 > th dose independent rect. 1 19
2 81.75 temperature 25 720 > th dose dependent rect. 20 3
5 82.23 wind 1 10 > th dose independent rect. 12 17
10 82.56 temperature 25 270 < th dose independent sin 10 NA
11 82.59 radiation 20 14400 < th dose independent rect. 21 9
15 82.77 wind 1 10 > th dose independent rect. 1 5
16 82.80 temperature 30 270 < th dose dependent rect. 23 6
18 82.82 atmosphere 1000 10 > th dose independent rect. 5 11
20 82.86 temperature 30 270 < th dose independent rect. 5 17
22 82.92 temperature 25 90 > th dose independent sin 9 NA
26 82.92 temperature 25 270 > th dose dependent rect. 18 15
28 82.96 temperature 25 720 < th dose independent rect. 16 8
29 82.96 wind 1 10 > th dose independent rect. 16 14
32 83.01 temperature 25 270 < th dose independent rect. 22 7
37 83.10 wind 9 14400 > th dose dependent rect. 22 17
42 83.16 temperature 30 270 < th dose independent rect. 9 22
43 83.17 wind 9 14400 > th dose dependent rect. 9 6
47 83.18 atmosphere 1000 270 > th dose independent rect. 2 23
51 83.20 atmosphere 1005 270 > th dose independent rect. 17 15
56 83.24 temperature 25 270 < th dose independent rect. 12 17
61 83.26 wind 9 14400 < th dose independent rect. 13 1
63 83.26 temperature 30 10 < th dose independent rect. 5 11
66 83.28 wind 5 4320 < th dose independent rect. 14 1
68 83.28 temperature 25 90 > th dose independent rect. 19 15
69 83.29 wind 9 14400 > th dose independent rect. 13 1
71 83.29 wind 9 14400 > th dose dependent rect. 24 15
75 83.31 temperature 25 90 < th dose independent rect. 12 21
83 83.34 wind 5 4320 > th dose independent rect. 14 1
85 83.34 atmosphere 1000 270 > th dose independent rect. 5 17
87 83.34 wind 9 14400 > th dose dependent rect. 3 12
97 83.37 temperature 25 720 < th dose independent rect. 15 12
103 83.38 temperature 15 720 > th dose dependent rect. 7 4
123 83.49 wind 1 30 > th dose independent rect. 23 21
124 83.49 temperature 20 720 > th dose dependent rect. 8 1
141 83.55 radiation 1 270 < th dose dependent rect. 22 20
159 83.62 temperature 30 720 < th dose independent rect. 4 8
163 83.64 temperature 25 720 < th dose independent sin 15 NA
180 83.67 temperature 25 30 > th dose dependent sin 10 NA
187 83.69 temperature 30 270 < th dose independent rect. 4 10
192 83.70 temperature 30 720 < th dose independent rect. 19 17
208 83.72 temperature 25 90 < th dose independent rect. 17 16
212 83.73 wind 9 14400 > th dose independent rect. 11 3
232 83.77 atmosphere 1000 10 > th dose independent rect. 5 7
234 83.77 wind 9 14400 > th dose independent rect. 22 18
236 83.78 wind 9 14400 > th dose independent rect. 13 3
241 83.79 radiation 1 10 < th dose dependent sin 3 NA
246 83.80 wind 9 14400 > th dose independent rect. 24 16
251 83.81 wind 9 14400 > th dose independent rect. 9 5
254 83.81 wind 9 14400 > th dose independent rect. 5 9
263 83.82 wind 9 14400 > th dose independent rect. 5 11
286 83.86 radiation 1 270 < th dose dependent rect. 23 15
289 83.87 wind 9 14400 > th dose independent rect. 3 13
295 83.87 radiation 1 270 < th dose dependent sin 7 NA
312 83.90 atmosphere 1005 30 > th dose independent rect. 20 13
317 83.90 radiation 1 270 < th dose independent rect. 22 20
342 83.93 temperature 20 10 > th dose dependent rect. 20 16
351 83.95 temperature 20 30 > th dose independent rect. 5 7
354 83.95 temperature 10 90 > th dose dependent rect. 5 22
360 83.96 temperature 25 720 > th dose dependent rect. 24 11
365 83.98 humidity 90 720 < th dose independent rect. 20 1
366 83.98 humidity 90 720 < th dose independent rect. 20 3
412 84.05 temperature 25 90 > th dose independent rect. 20 7
415 84.05 radiation 1 270 < th dose dependent rect. 23 10
417 84.06 atmosphere 1005 270 > th dose independent sin 11 NA
426 84.08 temperature 25 720 > th dose independent rect. 8 1
442 84.11 wind 1 30 > th dose independent rect. 1 7
443 84.11 wind 9 14400 < th dose independent rect. 7 8
447 84.12 temperature 25 720 < th dose independent rect. 21 1
448 84.12 wind 9 14400 < th dose independent rect. 9 6
461 84.13 wind 9 14400 < th dose independent rect. 5 10
463 84.13 wind 9 14400 < th dose independent rect. 22 18
468 84.14 wind 9 14400 < th dose independent rect. 24 15
487 84.16 temperature 30 270 < th dose independent rect. 4 21
489 84.16 radiation 1 30 < th dose dependent rect. 23 21
506 84.18 wind 9 14400 > th dose dependent sin 3 NA
509 84.18 wind 3 4320 > th dose dependent rect. 14 2
511 84.18 temperature 25 10 < th dose dependent rect. 24 8
518 84.19 temperature 30 270 < th dose independent rect. 2 23
526 84.20 radiation 1 10 > th dose independent rect. 5 11
541 84.21 wind 9 14400 < th dose independent rect. 3 12
559 84.23 radiation 1 720 < th dose independent rect. 16 3
594 84.26 radiation 1 270 < th dose independent rect. 23 15
627 84.31 wind 9 14400 > th dose independent sin 3 NA
630 84.31 atmosphere 1005 720 > th dose independent rect. 20 3
662 84.35 temperature 25 30 < th dose independent rect. 4 1
683 84.36 wind 9 14400 > th dose dependent rect. 19 21
702 84.38 temperature 10 10 > th dose dependent rect. 6 21
708 84.39 humidity 60 14400 > th dose independent rect. 21 9
728 84.40 radiation 1 720 < th dose dependent rect. 17 2
733 84.41 radiation 1 10 > th dose independent rect. 5 7
760 84.42 atmosphere 1005 720 > th dose independent rect. 19 6
764 84.42 atmosphere 1000 10 > th dose independent rect. 5 20
768 84.43 temperature 30 270 < th dose independent sin 0 NA
798 84.45 temperature 10 270 > th dose dependent rect. 7 11
801 84.46 radiation 1 270 < th dose independent rect. 23 11
809 84.47 atmosphere 1005 720 > th dose independent rect. 20 1
812 84.47 temperature 20 10 > th dose independent rect. 5 10
817 84.47 wind 9 14400 > th dose independent rect. 19 21
824 84.48 radiation 1 270 < th dose independent sin 7 NA
835 84.49 temperature 25 270 > th dose independent rect. 18 6
836 84.49 wind 9 14400 > th dose independent rect. 11 9
843 84.50 atmosphere 1000 270 > th dose independent rect. 4 8
849 84.50 radiation 20 720 < th dose dependent rect. 2 9
850 84.50 radiation 1 30 < th dose dependent rect. 1 19
857 84.51 wind 9 14400 > th dose dependent rect. 13 7
863 84.52 wind 9 14400 > th dose independent rect. 9 11
892 84.54 wind 9 14400 > th dose independent rect. 13 7
900 84.54 humidity 50 270 > th dose independent rect. 5 18
916 84.56 wind 1 10 > th dose independent sin 3 NA
917 84.56 temperature 25 720 < th dose independent rect. 17 2
937 84.57 temperature 10 270 > th dose dependent rect. 5 20
945 84.58 atmosphere 1000 10 > th dose independent rect. 5 22
957 84.59 wind 9 14400 > th dose independent rect. 24 20
966 84.60 temperature 30 10 < th dose independent rect. 8 8
970 84.60 wind 1 30 > th dose independent rect. 21 23
999 84.63 temperature 30 720 < th dose independent rect. 9 6