Os01g0530300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0530300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 206.09 | 0.674 | 4.47 | 2.12 | 2.14 | 1.63 | 3.16 | 2.6 | 0.661 | 18.8 | 0.1696 | 1429 | -- | -- |
| 209.88 | 0.675 | 4.45 | 2.5 | 2.11 | 1.1 | 3.08 | -- | 0.765 | 18.7 | 0.17 | 1424 | -- | -- |
| 231.4 | 0.708 | 4.47 | 2.1 | 2.13 | 1.61 | -- | 2.5 | 0.669 | 18.7 | 0.17 | 1443 | -- | -- |
| 234.53 | 0.713 | 4.44 | 2.3 | 2.18 | 0.986 | -- | -- | 0.742 | 18.8 | 0.1301 | 1417 | -- | -- |
| 462.91 | 1.01 | 4.4 | 1.98 | -- | 0.423 | -- | 0.262 | 0.564 | -- | 0.1699 | 1474 | -- | -- |
| 218.73 | 0.693 | 4.45 | 2.07 | 2.13 | -- | 3.16 | -- | 0.585 | 18.7 | -- | -- | -- | -- |
| 244 | 0.732 | 4.44 | 2.02 | 2.14 | -- | -- | -- | 0.593 | 18.7 | -- | -- | -- | -- |
| 461.97 | 1.01 | 4.39 | 1.99 | -- | 0.438 | -- | -- | 0.574 | -- | 0.1301 | 1417 | -- | -- |
| 344.22 | 0.864 | 4.47 | -- | 2.13 | 0.593 | -- | -- | 0.463 | 18.9 | 10 | 4294 | -- | -- |
| 482.97 | 1.03 | 4.4 | 1.97 | -- | -- | -- | -- | 0.551 | -- | -- | -- | -- | -- |
| 351.17 | 0.877 | 4.49 | -- | 2.11 | -- | -- | -- | 0.369 | 18.8 | -- | -- | -- | -- |
| 566.41 | 1.11 | 4.44 | -- | -- | 0.414 | -- | -- | 0.352 | -- | 0.1301 | 1417 | -- | -- |
| 585.12 | 1.13 | 4.45 | -- | -- | -- | -- | -- | 0.333 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 200.11 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 2 | 200.94 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 3 | 201.83 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 4 | 202.06 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 6 | 202.17 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 31 | 203.60 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 32 | 203.60 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 36 | 203.78 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 24 | 8 |
| 40 | 203.86 | humidity | 90.0 | 720 | > th | dose independent | rect. | 23 | 1 |
| 41 | 203.90 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 24 | 7 |
| 59 | 204.15 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 22 | 8 |
| 66 | 204.30 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 82 | 204.91 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 90 | 205.09 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 21 | 16 |
| 110 | 205.36 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 112 | 205.37 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 10 | 16 |
| 139 | 205.87 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 24 | 3 |
| 155 | 206.04 | wind | 3.0 | 720 | > th | dose dependent | rect. | 10 | 1 |
| 161 | 206.16 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 186 | 206.21 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 24 | 18 |
| 187 | 206.23 | temperature | 25.0 | 90 | > th | dose independent | rect. | 3 | 9 |
| 240 | 206.51 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 3 |
| 245 | 206.56 | radiation | 1.0 | 1440 | > th | dose independent | sin | 18 | NA |
| 247 | 206.56 | temperature | 25.0 | 10 | < th | dose independent | rect. | 1 | 8 |
| 248 | 206.57 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 23 | 3 |
| 269 | 206.71 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 270 | 206.71 | humidity | 90.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 273 | 206.72 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 275 | 206.73 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 17 |
| 276 | 206.73 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 281 | 206.76 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 289 | 206.77 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 306 | 206.80 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 310 | 206.81 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 361 | 206.93 | wind | 5.0 | 720 | > th | dose independent | rect. | 10 | 1 |
| 373 | 206.93 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 377 | 206.94 | temperature | 25.0 | 90 | > th | dose independent | rect. | 24 | 12 |
| 384 | 206.96 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 12 | 6 |
| 393 | 206.99 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 394 | 206.99 | temperature | 25.0 | 10 | > th | dose independent | rect. | 21 | 16 |
| 395 | 206.99 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 408 | 207.03 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 12 | 6 |
| 434 | 207.09 | wind | 7.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 435 | 207.09 | temperature | 25.0 | 90 | > th | dose independent | rect. | 21 | 15 |
| 442 | 207.10 | temperature | 25.0 | 90 | > th | dose independent | rect. | 6 | 6 |
| 446 | 207.10 | temperature | 25.0 | 10 | > th | dose independent | rect. | 23 | 14 |
| 472 | 207.14 | radiation | 1.0 | 1440 | < th | dose independent | sin | 18 | NA |
| 511 | 207.19 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 546 | 207.23 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 573 | 207.27 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 4 |
| 608 | 207.30 | wind | 7.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 621 | 207.31 | atmosphere | 1015.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 631 | 207.32 | temperature | 25.0 | 90 | < th | dose independent | rect. | 24 | 11 |
| 649 | 207.34 | atmosphere | 995.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 656 | 207.34 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 665 | 207.35 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 670 | 207.35 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 684 | 207.36 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 733 | 207.39 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 754 | 207.41 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 775 | 207.42 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 3 |
| 803 | 207.44 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 913 | 207.50 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 986 | 207.53 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 997 | 207.54 | wind | 5.0 | 14400 | < th | dose independent | rect. | 18 | 1 |