Os01g0516700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 28 domain containing protein.
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Os01g0516700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 28 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.96 | 0.304 | 9.06 | 1.04 | 0.222 | 0.769 | 0.368 | 2.12 | 0.399 | 20.9 | 20.5 | 3224 | -- | -- |
| 46.48 | 0.318 | 9.12 | 0.76 | 0.137 | 0.512 | 0.25 | -- | 0.357 | 20.6 | 24.71 | 3535 | -- | -- |
| 42.16 | 0.302 | 9.07 | 1.04 | 0.221 | 0.728 | -- | 2.04 | 0.402 | 21.6 | 20.6 | 3213 | -- | -- |
| 46.16 | 0.316 | 9.15 | 0.722 | 0.225 | 0.509 | -- | -- | 0.292 | 21.2 | 24.6 | 3048 | -- | -- |
| 44.85 | 0.312 | 9.06 | 1.06 | -- | 0.727 | -- | 2.03 | 0.394 | -- | 20.9 | 3441 | -- | -- |
| 52.21 | 0.339 | 9.12 | 0.917 | 0.231 | -- | 0.404 | -- | 0.431 | 20.8 | -- | -- | -- | -- |
| 52.63 | 0.34 | 9.12 | 0.902 | 0.23 | -- | -- | -- | 0.43 | 21.6 | -- | -- | -- | -- |
| 48.15 | 0.323 | 9.15 | 0.723 | -- | 0.506 | -- | -- | 0.274 | -- | 24.71 | 2144 | -- | -- |
| 49.54 | 0.328 | 9.2 | -- | 0.22 | 0.731 | -- | -- | 0.0822 | 21.4 | 21.47 | 47520 | -- | -- |
| 55.77 | 0.349 | 9.11 | 0.903 | -- | -- | -- | -- | 0.429 | -- | -- | -- | -- | -- |
| 74.05 | 0.403 | 9.14 | -- | 0.233 | -- | -- | -- | 0.329 | 21.9 | -- | -- | -- | -- |
| 52.34 | 0.337 | 9.19 | -- | -- | 0.743 | -- | -- | 0.0857 | -- | 21.09 | 47520 | -- | -- |
| 77.3 | 0.41 | 9.14 | -- | -- | -- | -- | -- | 0.329 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.57 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 2 | 40.57 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 3 | 40.58 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 6 | 40.69 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 15 | 40.87 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 22 | 40.97 | temperature | 20 | 4320 | > th | dose independent | rect. | 15 | 11 |
| 25 | 40.97 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 13 |
| 27 | 40.98 | temperature | 20 | 4320 | < th | dose independent | rect. | 15 | 11 |
| 57 | 41.17 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 75 | 41.28 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 76 | 41.28 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 77 | 41.29 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 78 | 41.29 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 79 | 41.29 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 115 | 41.47 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 127 | 41.50 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 6 |
| 179 | 41.59 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 291 | 41.77 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 400 | 41.98 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 417 | 42.01 | temperature | 25 | 4320 | < th | dose dependent | sin | 14 | NA |
| 780 | 42.52 | temperature | 10 | 4320 | > th | dose dependent | sin | 12 | NA |
| 891 | 42.64 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 1 |