Os01g0355600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Galactose-binding like domain containing protein.
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Os01g0355600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Galactose-binding like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.31 | 0.283 | 9.51 | 0.628 | 0.63 | 0.432 | -0.841 | 0.843 | 0.219 | 5.63 | 21.21 | 1371 | -- | -- |
| 37.75 | 0.286 | 9.52 | 0.479 | 0.63 | 0.327 | -0.762 | -- | 0.203 | 5.71 | 21.29 | 1140 | -- | -- |
| 37.9 | 0.287 | 9.51 | 0.651 | 0.638 | 0.399 | -- | 0.884 | 0.229 | 5.72 | 21.47 | 1740 | -- | -- |
| 38.69 | 0.29 | 9.53 | 0.458 | 0.652 | 0.371 | -- | -- | 0.184 | 6.07 | 21.21 | 840 | -- | -- |
| 58.34 | 0.356 | 9.52 | 0.66 | -- | 0.476 | -- | 0.9 | 0.229 | -- | 21.3 | 1367 | -- | -- |
| 41.34 | 0.301 | 9.52 | 0.576 | 0.639 | -- | -0.854 | -- | 0.273 | 5.57 | -- | -- | -- | -- |
| 43.09 | 0.307 | 9.51 | 0.573 | 0.636 | -- | -- | -- | 0.277 | 5.74 | -- | -- | -- | -- |
| 59.48 | 0.359 | 9.55 | 0.408 | -- | 0.4 | -- | -- | 0.17 | -- | 21.3 | 1231 | -- | -- |
| 42.95 | 0.305 | 9.55 | -- | 0.632 | 0.533 | -- | -- | 0.118 | 6.1 | 20.4 | 1060 | -- | -- |
| 64.05 | 0.374 | 9.52 | 0.593 | -- | -- | -- | -- | 0.292 | -- | -- | -- | -- | -- |
| 51.75 | 0.337 | 9.53 | -- | 0.645 | -- | -- | -- | 0.213 | 5.7 | -- | -- | -- | -- |
| 63.1 | 0.37 | 9.56 | -- | -- | 0.593 | -- | -- | 0.111 | -- | 20.04 | 2629 | -- | -- |
| 73.32 | 0.4 | 9.54 | -- | -- | -- | -- | -- | 0.226 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.97 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 35.05 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 3 | 35.18 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 4 | 35.19 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 5 | 35.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 6 | 35.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 7 | 35.30 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 8 | 35.30 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 9 | 35.33 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 10 | 35.34 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 19 | 35.62 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 23 | 35.70 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 27 | 35.76 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 28 | 35.76 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 21 |
| 30 | 35.78 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 34 | 35.80 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 36 | 35.81 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 43 | 35.85 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 49 | 35.89 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 68 | 35.99 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 69 | 36.00 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 76 | 36.03 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 85 | 36.05 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 15 |
| 86 | 36.05 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 97 | 36.09 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 2 |
| 105 | 36.10 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 13 |
| 112 | 36.12 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 17 |
| 116 | 36.13 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 17 |
| 117 | 36.13 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 17 |
| 119 | 36.14 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 164 | 36.21 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 177 | 36.23 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 183 | 36.23 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 184 | 36.24 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 219 | 36.27 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 223 | 36.28 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 235 | 36.29 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 237 | 36.29 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 239 | 36.29 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 249 | 36.30 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 2 |
| 252 | 36.31 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 276 | 36.33 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 12 |
| 277 | 36.34 | humidity | 80.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 294 | 36.37 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 300 | 36.38 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 312 | 36.39 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 326 | 36.41 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 15 |
| 357 | 36.44 | humidity | 80.0 | 720 | < th | dose independent | rect. | 16 | 20 |
| 419 | 36.50 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 470 | 36.56 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 472 | 36.56 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 473 | 36.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 478 | 36.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 479 | 36.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 483 | 36.57 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 516 | 36.60 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 521 | 36.60 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 524 | 36.60 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 534 | 36.61 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 563 | 36.64 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 9 |
| 577 | 36.66 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 12 |
| 582 | 36.66 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 585 | 36.66 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 6 |
| 642 | 36.71 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 5 |
| 643 | 36.71 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 653 | 36.71 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 5 |
| 659 | 36.72 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 2 |
| 660 | 36.72 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 675 | 36.73 | temperature | 20.0 | 720 | > th | dose independent | sin | 11 | NA |
| 698 | 36.74 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 702 | 36.74 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 715 | 36.75 | temperature | 25.0 | 90 | > th | dose independent | rect. | 17 | 9 |
| 723 | 36.75 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 724 | 36.75 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 732 | 36.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 788 | 36.79 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 9 |
| 796 | 36.79 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 9 |
| 800 | 36.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 807 | 36.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 863 | 36.83 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 899 | 36.85 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 9 |
| 915 | 36.86 | temperature | 25.0 | 10 | > th | dose independent | rect. | 17 | 9 |
| 930 | 36.86 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 20 | 11 |
| 975 | 36.89 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 989 | 36.89 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 4 |