Os01g0347100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1399 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0347100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF1399 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.6 | 0.381 | 9.33 | 1.01 | 3.01 | 2.33 | -0.347 | -0.0287 | 0.585 | 1.55 | 29.18 | 101 | 19.1 | -- |
| 65.57 | 0.377 | 9.33 | 1 | 3.01 | 2.33 | -0.324 | -- | 0.581 | 1.55 | 29.18 | 108 | 19.1 | -- |
| 65.9 | 0.378 | 9.34 | 0.983 | 3 | 2.33 | -- | 0.338 | 0.576 | 1.57 | 29.05 | 108 | 19.1 | -- |
| 66.01 | 0.378 | 9.33 | 1.01 | 3.01 | 2.29 | -- | -- | 0.581 | 1.57 | 29.16 | 110 | 19.1 | -- |
| 114.8 | 0.499 | 9.26 | 0.745 | -- | 3.17 | -- | 0.742 | 0.536 | -- | 52.94 | 41 | 4.13 | -- |
| 104.02 | 0.478 | 9.37 | 0.678 | 2.75 | -- | 0.318 | -- | 0.349 | 2.23 | -- | -- | -- | -- |
| 104.39 | 0.478 | 9.37 | 0.669 | 2.75 | -- | -- | -- | 0.347 | 2.23 | -- | -- | -- | -- |
| 104.68 | 0.477 | 9.35 | 0.689 | -- | 2.81 | -- | -- | 0.384 | -- | 166.7 | 252 | 5.89 | -- |
| 90.8 | 0.444 | 9.37 | -- | 2.97 | 1.83 | -- | -- | 0.437 | 1.59 | 29.5 | 130 | 19.7 | -- |
| 555.17 | 1.1 | 9.35 | 0.785 | -- | -- | -- | -- | 0.413 | -- | -- | -- | -- | -- |
| 116.19 | 0.504 | 9.39 | -- | 2.76 | -- | -- | -- | 0.272 | 2.23 | -- | -- | -- | -- |
| 116.85 | 0.503 | 9.36 | -- | -- | 2.79 | -- | -- | 0.304 | -- | 316 | 269 | 6.04 | -- |
| 571.41 | 1.12 | 9.37 | -- | -- | -- | -- | -- | 0.326 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.28 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 10 |
| 7 | 59.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 15 | 61.71 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 46 | 64.81 | temperature | 25 | 270 | > th | dose independent | rect. | 5 | 9 |
| 70 | 66.13 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 17 |
| 71 | 66.15 | temperature | 30 | 90 | < th | dose dependent | sin | 1 | NA |
| 78 | 66.79 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 11 |
| 91 | 67.05 | temperature | 30 | 10 | < th | dose dependent | sin | 0 | NA |
| 110 | 67.54 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 16 |
| 119 | 67.87 | temperature | 20 | 90 | > th | dose dependent | sin | 2 | NA |
| 136 | 68.27 | temperature | 25 | 90 | > th | dose independent | sin | 2 | NA |
| 145 | 68.56 | temperature | 20 | 10 | > th | dose dependent | sin | 1 | NA |
| 238 | 70.01 | temperature | 25 | 90 | < th | dose independent | sin | 1 | NA |
| 319 | 71.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 325 | 71.67 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 19 |
| 380 | 72.37 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 14 |
| 384 | 72.39 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 14 |
| 406 | 72.55 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 12 |
| 422 | 72.73 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 12 |
| 461 | 73.08 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 4 |
| 493 | 73.44 | temperature | 25 | 90 | > th | dose independent | rect. | 23 | 18 |
| 497 | 73.45 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 559 | 74.13 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 16 |
| 584 | 74.36 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 20 |
| 604 | 74.60 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 7 |
| 605 | 74.60 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 18 |
| 653 | 74.97 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 2 |
| 695 | 75.23 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 5 |
| 722 | 75.40 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 18 |
| 723 | 75.40 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 20 |
| 728 | 75.47 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 796 | 75.88 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 18 |
| 997 | 76.96 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 18 |