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Os01g0338600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0185) R2 : 0.721
β1 : -1.63 (0.0677) R2dD : 0.369 R2D : 0.207
β2 : 0.994 (0.0482) R2dC : 0.263 R2C : 0.18
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.729 (0.0395) R2dN8 : 0.28 R2N8 : 0.0973
σ : 0.348
deviance : 55.1
__
_____
C
peak time of C : 6.61
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
46.71 0.321 11.4 -1.5 0.99 -0.953 0.23 -2.26 -0.771 6.78 0.7002 1427 -- --
51.38 0.334 11.3 -1.6 1.01 -0.523 0.178 -- -0.727 6.89 1.15 1379 -- --
46.81 0.319 11.4 -1.5 0.996 -0.937 -- -2.2 -0.768 6.88 0.7045 1415 -- --
50.1 0.33 11.4 -1.61 0.979 -0.41 -- -- -0.745 6.68 2.1 1438 -- --
96.24 0.457 11.4 -1.53 -- -1 -- -2.02 -0.779 -- 0.8117 1467 -- --
54.98 0.348 11.4 -1.63 0.994 -- 0.215 -- -0.728 6.6 -- -- -- --
55.1 0.348 11.4 -1.63 0.994 -- -- -- -0.729 6.61 -- -- -- --
62.75 0.369 11.4 -1.49 -- 1.17 -- -- -0.585 -- 2.437e-05 787 -- --
115.96 0.502 11.4 -- 1.11 -0.422 -- -- -0.67 6.59 6.618 5985 -- --
106.63 0.483 11.4 -1.61 -- -- -- -- -0.709 -- -- -- -- --
125.15 0.523 11.3 -- 0.974 -- -- -- -0.547 6.7 -- -- -- --
120.11 0.51 11.4 -- -- 1.41 -- -- -0.534 -- 0.007549 817 -- --
174.71 0.617 11.4 -- -- -- -- -- -0.53 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 45.04 precipitation 0.1 43200 > th dose dependent rect. 17 3
13 45.94 radiation 10.0 43200 < th dose dependent rect. 19 7
14 45.98 temperature 30.0 14400 < th dose independent rect. 1 8
18 46.03 precipitation 0.1 43200 > th dose independent rect. 16 2
21 46.08 temperature 30.0 14400 < th dose independent rect. 23 10
24 46.10 temperature 30.0 14400 < th dose independent rect. 6 3
25 46.10 temperature 30.0 14400 < th dose independent rect. 21 12
26 46.11 precipitation 0.1 43200 < th dose independent rect. 16 2
28 46.11 precipitation 0.1 43200 < th dose dependent rect. 16 2
30 46.15 temperature 30.0 14400 < th dose independent rect. 8 1
41 46.26 wind 9.0 43200 < th dose independent rect. 19 2
44 46.30 temperature 30.0 14400 > th dose independent rect. 8 1
59 46.33 wind 9.0 43200 > th dose independent rect. 19 2
66 46.42 wind 9.0 43200 > th dose dependent rect. 19 2
68 46.48 precipitation 0.1 43200 > th dose dependent rect. 19 2
74 46.55 wind 1.0 43200 > th dose independent rect. 24 4
76 46.57 wind 1.0 43200 < th dose independent rect. 1 2
82 46.60 humidity 80.0 14400 > th dose independent rect. 17 1
83 46.60 temperature 30.0 14400 > th dose dependent rect. 8 1
102 46.64 wind 1.0 14400 > th dose independent rect. 2 1
105 46.67 temperature 10.0 270 > th dose dependent rect. 3 8
113 46.73 humidity 80.0 43200 > th dose dependent rect. 21 1
114 46.74 wind 1.0 43200 < th dose independent rect. 24 4
127 46.81 temperature 30.0 14400 > th dose dependent rect. 18 16
128 46.82 wind 1.0 14400 < th dose dependent rect. 2 3
138 46.90 radiation 1.0 1440 < th dose dependent sin 23 NA
139 46.90 radiation 1.0 1440 < th dose dependent rect. 7 12
141 46.91 temperature 30.0 14400 > th dose independent rect. 14 1
143 46.92 radiation 1.0 1440 < th dose dependent rect. 7 15
144 46.93 temperature 30.0 14400 < th dose independent rect. 15 1
150 46.94 humidity 80.0 14400 < th dose independent rect. 17 1
151 46.94 radiation 1.0 1440 < th dose dependent rect. 7 17
154 46.95 humidity 80.0 14400 < th dose independent rect. 16 3
172 46.96 radiation 1.0 1440 < th dose dependent rect. 7 21
200 46.99 atmosphere 1000.0 270 > th dose independent rect. 11 17
222 47.05 atmosphere 1000.0 43200 < th dose independent rect. 12 1
225 47.05 temperature 30.0 14400 < th dose independent rect. 14 20
231 47.06 atmosphere 1000.0 270 > th dose independent rect. 9 21
233 47.07 atmosphere 1000.0 43200 > th dose independent rect. 12 1
239 47.07 temperature 30.0 14400 > th dose independent rect. 14 20
258 47.12 humidity 80.0 43200 < th dose independent rect. 6 2
262 47.12 precipitation 0.1 43200 > th dose dependent rect. 6 12
266 47.13 humidity 80.0 43200 > th dose dependent rect. 20 3
269 47.14 wind 9.0 43200 < th dose independent rect. 20 5
276 47.15 radiation 1.0 1440 < th dose dependent rect. 3 15
286 47.18 radiation 1.0 1440 < th dose dependent rect. 23 19
298 47.20 radiation 1.0 1440 < th dose dependent rect. 21 21
319 47.27 precipitation 0.1 43200 < th dose independent rect. 19 2
321 47.27 precipitation 0.1 43200 < th dose dependent rect. 19 2
323 47.28 humidity 80.0 43200 > th dose independent rect. 6 1
337 47.29 temperature 30.0 14400 < th dose independent rect. 14 8
338 47.29 temperature 30.0 14400 < th dose independent rect. 14 16
356 47.30 radiation 1.0 43200 < th dose dependent rect. 22 3
359 47.31 temperature 30.0 14400 > th dose independent rect. 14 5
396 47.35 precipitation 0.1 43200 > th dose independent rect. 19 2
419 47.37 temperature 25.0 14400 > th dose dependent rect. 17 2
422 47.38 atmosphere 1000.0 43200 < th dose independent rect. 19 1
466 47.41 atmosphere 1000.0 43200 > th dose independent rect. 19 1
527 47.44 wind 1.0 14400 < th dose dependent rect. 2 1
529 47.44 wind 1.0 43200 < th dose dependent rect. 24 5
537 47.45 temperature 30.0 14400 > th dose independent sin 11 NA
547 47.45 radiation 1.0 1440 < th dose dependent no NA NA
556 47.45 radiation 1.0 1440 < th dose dependent rect. 9 23
557 47.45 radiation 1.0 1440 < th dose dependent rect. 11 23
578 47.47 temperature 30.0 14400 < th dose independent sin 11 NA
597 47.47 wind 9.0 43200 > th dose dependent rect. 17 1
632 47.48 radiation 1.0 1440 < th dose dependent rect. 16 23
652 47.49 radiation 1.0 43200 < th dose dependent rect. 24 1
732 47.52 atmosphere 1000.0 43200 < th dose dependent rect. 11 1
744 47.53 atmosphere 1000.0 43200 < th dose independent sin 0 NA
746 47.53 temperature 25.0 14400 < th dose independent rect. 19 1
752 47.53 atmosphere 1000.0 43200 < th dose independent rect. 10 10
781 47.54 humidity 80.0 14400 < th dose independent rect. 13 15
786 47.54 temperature 25.0 10 > th dose dependent sin 8 NA
822 47.56 atmosphere 1000.0 43200 > th dose independent sin 0 NA
831 47.56 precipitation 0.1 14400 < th dose independent rect. 17 7
846 47.56 atmosphere 1000.0 43200 < th dose dependent rect. 14 1
852 47.56 precipitation 0.1 14400 < th dose dependent rect. 17 7
856 47.57 temperature 30.0 4320 < th dose independent rect. 11 1
860 47.57 precipitation 0.1 14400 > th dose independent rect. 17 7
862 47.57 atmosphere 1000.0 43200 > th dose independent rect. 10 10
882 47.57 radiation 1.0 1440 < th dose dependent rect. 9 19
938 47.59 humidity 80.0 14400 < th dose independent rect. 16 8
959 47.59 temperature 30.0 14400 > th dose independent rect. 18 23
968 47.59 humidity 80.0 14400 < th dose dependent rect. 16 15