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Os01g0331900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF846, eukaryotic family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0157) R2 : 0.00111
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0236 (0.0331) R2dN8 : 0.00144 R2N8 : 0.00111
σ : 0.296
deviance : 40.22
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
24.67 0.233 11.3 -0.74 0.394 0.428 0.191 -3.71 -0.182 16 25.34 1628 -- --
28.28 0.248 11.1 0.182 0.415 0.154 0.199 -- 0.0397 16 17.92 1702 -- --
24.76 0.232 11.3 -0.777 0.395 0.438 -- -3.88 -0.187 16 25.5 1625 -- --
28.24 0.248 11.1 0.165 0.436 0.227 -- -- 0.0178 16.1 14.81 1652 -- --
32.58 0.266 11.3 -1.07 -- 0.685 -- -5.83 -0.218 -- 26.6 1731 -- --
28.99 0.252 11.1 0.226 0.427 -- 0.17 -- 0.0574 16.1 -- -- -- --
29.08 0.253 11.1 0.228 0.428 -- -- -- 0.0583 16.1 -- -- -- --
33.5 0.271 11.2 0.0976 -- 0.62 -- -- -0.0357 -- 9.979 6188 -- --
28.69 0.249 11.2 -- 0.442 0.328 -- -- -0.0102 15.6 13.22 956 -- --
39.05 0.292 11.1 0.21 -- -- -- -- 0.0469 -- -- -- -- --
30.44 0.258 11.1 -- 0.424 -- -- -- 0.033 16.1 -- -- -- --
33.74 0.271 11.2 -- -- 0.648 -- -- -0.0503 -- 13.22 956 -- --
40.22 0.296 11.1 -- -- -- -- -- 0.0236 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.30 temperature 15.0 10 > th dose dependent rect. 12 17
6 23.56 wind 1.0 43200 > th dose independent rect. 4 4
8 23.59 wind 1.0 43200 < th dose independent rect. 4 4
9 23.71 wind 1.0 43200 < th dose dependent rect. 4 4
10 23.80 temperature 10.0 270 > th dose dependent rect. 11 15
12 23.82 radiation 1.0 30 < th dose dependent sin 19 NA
13 23.82 wind 1.0 43200 < th dose dependent rect. 6 1
20 23.95 radiation 20.0 14400 < th dose independent rect. 24 6
23 24.00 radiation 1.0 90 < th dose independent sin 20 NA
27 24.02 radiation 1.0 90 > th dose independent sin 20 NA
36 24.12 radiation 1.0 270 < th dose dependent rect. 15 5
40 24.16 radiation 1.0 90 < th dose independent rect. 15 8
45 24.22 temperature 30.0 90 < th dose dependent rect. 17 6
50 24.25 radiation 1.0 90 < th dose dependent rect. 15 8
51 24.25 radiation 1.0 270 < th dose dependent rect. 5 15
52 24.26 radiation 1.0 270 < th dose dependent rect. 17 2
55 24.28 wind 9.0 43200 < th dose independent rect. 18 1
57 24.28 wind 9.0 43200 > th dose dependent rect. 18 2
58 24.29 wind 5.0 270 < th dose independent rect. 21 7
74 24.33 humidity 50.0 270 > th dose independent rect. 16 17
79 24.35 wind 9.0 43200 > th dose independent rect. 18 1
86 24.37 radiation 1.0 270 < th dose dependent rect. 8 12
94 24.41 radiation 1.0 270 < th dose independent rect. 15 5
95 24.41 humidity 50.0 270 > th dose independent rect. 15 7
96 24.41 humidity 50.0 90 > th dose dependent rect. 17 6
107 24.43 wind 1.0 43200 < th dose independent rect. 2 6
108 24.43 radiation 1.0 90 > th dose independent rect. 11 8
130 24.46 humidity 50.0 270 > th dose independent rect. 16 5
133 24.47 wind 1.0 43200 > th dose independent rect. 21 1
134 24.47 wind 1.0 43200 > th dose independent rect. 2 6
139 24.48 temperature 20.0 270 > th dose independent rect. 9 8
141 24.48 radiation 10.0 10 < th dose dependent sin 6 NA
145 24.50 precipitation 0.1 270 < th dose independent rect. 11 16
146 24.50 radiation 20.0 270 < th dose dependent rect. 16 5
148 24.50 precipitation 0.1 270 < th dose dependent rect. 11 16
154 24.54 radiation 40.0 10 < th dose dependent sin 8 NA
158 24.56 wind 1.0 43200 < th dose independent rect. 21 1
159 24.56 humidity 80.0 43200 > th dose independent rect. 12 1
161 24.56 radiation 40.0 270 < th dose dependent rect. 15 7
162 24.56 radiation 1.0 10 < th dose dependent rect. 15 9
166 24.57 temperature 15.0 270 > th dose independent rect. 21 7
167 24.58 radiation 10.0 4320 < th dose dependent rect. 8 1
172 24.59 radiation 30.0 270 < th dose independent rect. 15 7
174 24.59 temperature 15.0 270 > th dose independent rect. 22 17
182 24.60 humidity 80.0 43200 > th dose dependent rect. 12 1
189 24.61 radiation 1.0 270 < th dose independent rect. 8 12
194 24.62 atmosphere 1000.0 270 > th dose independent rect. 9 7
195 24.62 radiation 1.0 270 > th dose independent rect. 9 8
198 24.62 radiation 40.0 90 < th dose independent rect. 23 18
202 24.63 radiation 10.0 10 < th dose dependent rect. 23 15
205 24.64 wind 5.0 90 < th dose independent rect. 23 6
206 24.64 temperature 30.0 90 < th dose independent rect. 17 6
208 24.64 wind 1.0 43200 < th dose dependent rect. 19 3
209 24.64 temperature 30.0 270 < th dose dependent rect. 16 4
211 24.65 radiation 40.0 43200 < th dose independent rect. 16 8
213 24.65 radiation 1.0 270 < th dose independent rect. 5 15
215 24.65 wind 1.0 43200 < th dose dependent rect. 21 1
226 24.67 wind 1.0 43200 < th dose dependent rect. 2 6
227 24.67 wind 9.0 270 < th dose dependent rect. 21 7
228 24.67 radiation 10.0 10 < th dose dependent rect. 23 13
247 24.70 precipitation 0.1 270 < th dose independent rect. 21 7
248 24.70 wind 9.0 270 < th dose independent rect. 23 16
251 24.70 precipitation 0.1 270 < th dose dependent rect. 21 7
259 24.71 radiation 1.0 270 < th dose dependent sin 23 NA
263 24.71 radiation 40.0 90 < th dose dependent rect. 23 18
266 24.72 precipitation 0.1 43200 < th dose independent rect. 9 1
268 24.72 precipitation 0.1 43200 < th dose dependent rect. 9 1
278 24.74 wind 1.0 43200 > th dose independent rect. 19 1
279 24.74 wind 1.0 43200 < th dose independent rect. 19 1
280 24.74 wind 9.0 270 < th dose independent rect. 15 8
286 24.75 precipitation 0.1 43200 > th dose independent rect. 9 1
287 24.75 radiation 20.0 270 < th dose independent rect. 16 5
289 24.75 temperature 10.0 270 > th dose independent rect. 15 8
290 24.75 temperature 15.0 270 > th dose independent rect. 11 16
294 24.75 precipitation 0.1 43200 > th dose dependent rect. 9 1
306 24.77 temperature 20.0 90 > th dose independent rect. 11 7
308 24.77 temperature 30.0 270 < th dose independent rect. 21 7
309 24.77 humidity 50.0 270 > th dose independent rect. 21 7
312 24.77 atmosphere 995.0 270 > th dose independent rect. 21 7
313 24.77 radiation 1.0 270 < th dose independent rect. 21 7
318 24.77 precipitation 0.1 270 < th dose independent rect. 23 16
319 24.77 temperature 10.0 270 > th dose independent rect. 4 17
320 24.77 precipitation 0.1 43200 > th dose dependent rect. 21 1
323 24.77 radiation 1.0 270 < th dose dependent rect. 21 7
330 24.77 radiation 1.0 90 < th dose dependent rect. 23 15
332 24.77 precipitation 0.1 270 < th dose dependent rect. 23 16
334 24.78 precipitation 0.1 43200 < th dose independent rect. 21 1
335 24.78 atmosphere 995.0 270 > th dose independent rect. 23 16
338 24.78 precipitation 0.1 43200 < th dose dependent rect. 21 1
342 24.78 radiation 10.0 10 < th dose dependent rect. 23 18
343 24.79 precipitation 0.1 43200 > th dose independent rect. 21 1
347 24.79 humidity 50.0 270 > th dose independent rect. 3 8
354 24.80 wind 1.0 43200 < th dose independent rect. 19 3
355 24.80 temperature 15.0 90 > th dose independent rect. 23 6
358 24.80 wind 9.0 270 < th dose independent rect. 4 17
360 24.80 atmosphere 1015.0 270 < th dose independent rect. 4 17
373 24.81 humidity 70.0 43200 > th dose independent rect. 18 2
381 24.82 humidity 70.0 43200 < th dose independent rect. 18 2
383 24.82 humidity 70.0 43200 < th dose independent rect. 18 4
389 24.82 radiation 1.0 4320 < th dose dependent rect. 17 8
391 24.82 radiation 1.0 90 < th dose dependent rect. 23 9
393 24.82 radiation 1.0 90 < th dose dependent rect. 23 12
400 24.83 radiation 1.0 4320 < th dose dependent rect. 17 3
403 24.83 wind 9.0 90 < th dose dependent rect. 23 6
412 24.84 temperature 25.0 43200 > th dose independent rect. 11 1
420 24.84 humidity 50.0 270 > th dose dependent rect. 17 3
426 24.85 radiation 10.0 43200 > th dose independent rect. 7 2
429 24.85 radiation 10.0 43200 < th dose independent rect. 18 6
437 24.86 radiation 1.0 270 < th dose independent sin 23 NA
439 24.86 precipitation 0.1 43200 > th dose independent rect. 18 1
452 24.87 temperature 25.0 43200 < th dose independent rect. 11 1
458 24.87 wind 1.0 270 > th dose independent rect. 15 8
459 24.87 radiation 10.0 14400 > th dose dependent rect. 6 1
460 24.87 precipitation 0.1 43200 > th dose dependent rect. 18 1
468 24.88 humidity 70.0 43200 > th dose independent rect. 9 1
469 24.88 radiation 1.0 43200 < th dose independent rect. 13 1
470 24.88 precipitation 0.1 43200 < th dose independent rect. 18 1
476 24.88 radiation 1.0 43200 < th dose dependent rect. 13 1
477 24.88 precipitation 0.1 43200 < th dose dependent rect. 18 1
488 24.88 temperature 20.0 90 > th dose dependent rect. 12 6
491 24.88 temperature 10.0 90 > th dose dependent rect. 11 7
492 24.88 temperature 10.0 270 > th dose dependent rect. 21 7
507 24.89 radiation 1.0 270 > th dose independent sin 23 NA
508 24.89 radiation 1.0 43200 > th dose independent rect. 13 1
509 24.89 radiation 10.0 43200 < th dose independent rect. 10 1
530 24.89 radiation 40.0 90 < th dose independent rect. 11 18
563 24.90 radiation 1.0 10 > th dose dependent sin 9 NA
570 24.90 temperature 25.0 1440 > th dose dependent rect. 9 12
573 24.90 temperature 25.0 1440 > th dose dependent rect. 9 16
575 24.90 radiation 1.0 4320 < th dose dependent rect. 16 17
581 24.91 radiation 20.0 14400 < th dose independent rect. 5 3
585 24.91 precipitation 0.1 43200 < th dose independent rect. 18 4
586 24.91 precipitation 0.1 43200 > th dose independent rect. 14 5
588 24.91 radiation 1.0 90 < th dose independent rect. 23 8
594 24.91 atmosphere 1015.0 270 < th dose independent rect. 23 16
596 24.91 precipitation 0.1 43200 < th dose dependent rect. 18 4
598 24.91 temperature 25.0 1440 > th dose dependent rect. 9 10
609 24.91 radiation 40.0 90 < th dose dependent rect. 23 16
622 24.92 temperature 10.0 270 > th dose independent rect. 3 8
623 24.92 atmosphere 995.0 270 > th dose independent rect. 3 8
624 24.92 atmosphere 1015.0 270 < th dose independent rect. 3 8
625 24.92 precipitation 0.1 270 < th dose independent rect. 9 8
635 24.92 precipitation 0.1 270 < th dose dependent rect. 9 8
645 24.93 radiation 20.0 43200 > th dose independent rect. 9 2
651 24.93 radiation 1.0 90 < th dose independent rect. 23 15
653 24.93 temperature 25.0 1440 > th dose dependent sin 18 NA
663 24.93 temperature 30.0 10 < th dose dependent rect. 17 6
670 24.93 radiation 10.0 270 < th dose dependent rect. 21 14
675 24.94 precipitation 0.1 43200 > th dose independent rect. 18 4
678 24.94 wind 9.0 270 < th dose independent rect. 3 8
689 24.94 temperature 10.0 90 > th dose dependent rect. 23 6
701 24.95 precipitation 0.1 43200 > th dose independent rect. 16 1
706 24.95 temperature 30.0 270 < th dose independent rect. 17 3
714 24.95 precipitation 0.1 43200 < th dose independent rect. 14 5
719 24.95 temperature 30.0 90 < th dose independent rect. 23 6
720 24.95 humidity 50.0 90 > th dose independent rect. 23 6
724 24.95 atmosphere 995.0 90 > th dose independent rect. 23 6
727 24.95 radiation 20.0 90 < th dose independent rect. 23 6
732 24.95 precipitation 0.1 270 < th dose independent rect. 3 8
749 24.95 radiation 40.0 10 < th dose independent rect. 12 17
752 24.95 humidity 50.0 90 > th dose independent rect. 5 18
756 24.95 radiation 1.0 4320 < th dose dependent sin 12 NA
759 24.95 radiation 20.0 43200 < th dose dependent rect. 8 3
760 24.95 precipitation 0.1 43200 < th dose dependent rect. 14 5
763 24.95 radiation 20.0 90 < th dose dependent rect. 23 6
767 24.95 precipitation 0.1 270 < th dose dependent rect. 3 8
784 24.96 humidity 80.0 43200 < th dose independent rect. 12 1
790 24.96 radiation 1.0 90 < th dose independent rect. 23 6
797 24.96 wind 9.0 270 < th dose independent rect. 11 16
820 24.97 radiation 10.0 4320 < th dose independent rect. 8 1
822 24.97 humidity 90.0 43200 > th dose independent rect. 9 2
833 24.97 humidity 70.0 43200 < th dose independent rect. 18 15
853 24.98 precipitation 0.1 43200 < th dose independent rect. 16 1
854 24.98 humidity 70.0 43200 < th dose independent rect. 9 2
860 24.98 precipitation 0.1 90 < th dose independent rect. 23 6
874 24.98 precipitation 0.1 43200 < th dose dependent rect. 16 1
877 24.98 precipitation 0.1 90 < th dose dependent rect. 23 6
888 24.99 wind 1.0 43200 > th dose independent rect. 19 3
893 24.99 humidity 90.0 90 < th dose independent rect. 11 7
897 24.99 temperature 30.0 270 < th dose independent rect. 16 17
902 24.99 radiation 1.0 43200 < th dose dependent rect. 23 6
922 25.00 humidity 60.0 270 > th dose independent rect. 17 3
930 25.00 precipitation 0.1 90 < th dose independent rect. 11 7
931 25.00 wind 9.0 270 < th dose independent rect. 17 16
935 25.00 wind 1.0 14400 < th dose dependent rect. 22 3
938 25.00 precipitation 0.1 90 < th dose dependent rect. 11 7
950 25.00 radiation 1.0 4320 < th dose dependent rect. 16 20
953 25.00 temperature 25.0 1440 > th dose dependent rect. 24 21
956 25.00 temperature 25.0 1440 > th dose dependent rect. 13 23
964 25.01 radiation 40.0 270 < th dose independent rect. 9 7
966 25.01 atmosphere 1015.0 270 < th dose independent rect. 9 8
969 25.01 humidity 70.0 43200 > th dose independent rect. 18 15
970 25.01 temperature 10.0 270 > th dose independent rect. 17 16
974 25.01 radiation 1.0 43200 < th dose dependent rect. 4 1