Os01g0303600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RINGv domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0303600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : RINGv domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 287.9 | 0.797 | 5.36 | -5.44 | 1.22 | -1.26 | -2.14 | 2.2 | -0.828 | 11.9 | 20.69 | 1977 | -- | -- |
| 293.41 | 0.798 | 5.35 | -5.21 | 1.22 | -1.03 | -2.09 | -- | -0.793 | 12.2 | 43 | 1972 | -- | -- |
| 303.51 | 0.811 | 5.37 | -5.56 | 1.09 | -1.11 | -- | 2.24 | -0.831 | 12.7 | 36.16 | 1638 | -- | -- |
| 310.68 | 0.821 | 5.36 | -5.33 | 1.19 | -0.881 | -- | -- | -0.779 | 13.1 | 39.02 | 1493 | -- | -- |
| 347.2 | 0.873 | 5.37 | -5.34 | -- | -1.14 | -- | 1.71 | -0.821 | -- | 61.97 | 1669 | -- | -- |
| 312.58 | 0.829 | 5.34 | -5.2 | 1.19 | -- | -2.08 | -- | -0.734 | 12.9 | -- | -- | -- | -- |
| 330.76 | 0.852 | 5.35 | -5.28 | 1.2 | -- | -- | -- | -0.743 | 13.1 | -- | -- | -- | -- |
| 356.65 | 0.883 | 5.38 | -5.29 | -- | -1.1 | -- | -- | -0.811 | -- | 61.97 | 1669 | -- | -- |
| 1006.5 | 1.48 | 5.33 | -- | 1.31 | -1.79 | -- | -- | -0.653 | 13.3 | 55.02 | 8537 | -- | -- |
| 420.11 | 0.958 | 5.37 | -5.32 | -- | -- | -- | -- | -0.767 | -- | -- | -- | -- | -- |
| 1065.15 | 1.53 | 5.22 | -- | 1.29 | -- | -- | -- | -0.156 | 13.2 | -- | -- | -- | -- |
| 922.69 | 1.41 | 5.31 | -- | -- | -4.39 | -- | -- | -0.525 | -- | 2.307 | 47520 | -- | -- |
| 1167.81 | 1.6 | 5.23 | -- | -- | -- | -- | -- | -0.176 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 262.44 | temperature | 25 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 3 | 262.84 | temperature | 30 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 5 | 262.98 | temperature | 25 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 6 | 262.99 | temperature | 30 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 9 | 263.03 | temperature | 30 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 11 | 263.04 | temperature | 30 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 22 | 263.56 | temperature | 30 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 36 | 263.68 | temperature | 30 | 43200 | > th | dose dependent | rect. | 17 | 16 |
| 37 | 263.69 | temperature | 30 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 51 | 263.70 | temperature | 25 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 179 | 266.44 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 196 | 266.64 | temperature | 30 | 43200 | > th | dose dependent | sin | 11 | NA |
| 209 | 266.98 | temperature | 25 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 233 | 267.18 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 285 | 267.46 | temperature | 25 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 296 | 267.57 | temperature | 30 | 43200 | > th | dose independent | sin | 10 | NA |
| 298 | 267.59 | temperature | 30 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 310 | 267.67 | temperature | 30 | 43200 | < th | dose independent | sin | 10 | NA |
| 316 | 267.69 | temperature | 30 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 355 | 267.85 | temperature | 30 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 633 | 269.36 | temperature | 30 | 43200 | > th | dose dependent | no | NA | NA |
| 634 | 269.36 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 11 |
| 859 | 269.82 | radiation | 1 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 870 | 269.83 | radiation | 1 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 872 | 269.85 | radiation | 1 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 873 | 269.85 | radiation | 1 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 914 | 270.05 | radiation | 10 | 43200 | > th | dose independent | rect. | 9 | 7 |