Os01g0303200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0303200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.44 | 0.383 | 6.49 | 0.0363 | 0.66 | 1.1 | 0.285 | 0.266 | 0.0669 | 10.3 | 8.694 | 2531 | -- | -- |
| 66.5 | 0.38 | 6.5 | -0.0294 | 0.659 | 1.1 | 0.266 | -- | 0.0496 | 10.3 | 9.318 | 2531 | -- | -- |
| 66.74 | 0.38 | 6.49 | 0.0286 | 0.657 | 1.09 | -- | 0.192 | 0.0638 | 10.2 | 9.085 | 2544 | -- | -- |
| 66.77 | 0.381 | 6.5 | -0.017 | 0.661 | 1.09 | -- | -- | 0.0506 | 10.2 | 13.05 | 2525 | -- | -- |
| 86.03 | 0.434 | 6.49 | 0.242 | -- | 1.26 | -- | 0.524 | 0.126 | -- | 7.682 | 3031 | -- | -- |
| 90.24 | 0.445 | 6.45 | 0.401 | 0.571 | -- | 0.143 | -- | 0.274 | 9.72 | -- | -- | -- | -- |
| 90.31 | 0.445 | 6.45 | 0.406 | 0.571 | -- | -- | -- | 0.274 | 9.65 | -- | -- | -- | -- |
| 86.27 | 0.434 | 6.5 | 0.17 | -- | 1.27 | -- | -- | 0.106 | -- | 7.682 | 3031 | -- | -- |
| 66.78 | 0.381 | 6.5 | -- | 0.66 | 1.09 | -- | -- | 0.0536 | 10.2 | 13.14 | 2525 | -- | -- |
| 109.64 | 0.489 | 6.46 | 0.402 | -- | -- | -- | -- | 0.275 | -- | -- | -- | -- | -- |
| 94.66 | 0.455 | 6.46 | -- | 0.57 | -- | -- | -- | 0.229 | 9.59 | -- | -- | -- | -- |
| 86.99 | 0.436 | 6.51 | -- | -- | 1.33 | -- | -- | 0.0807 | -- | 10.48 | 3016 | -- | -- |
| 113.89 | 0.498 | 6.47 | -- | -- | -- | -- | -- | 0.23 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 10 | 65.15 | radiation | 40 | 4320 | < th | dose dependent | rect. | 2 | 4 |
| 11 | 65.22 | radiation | 40 | 4320 | < th | dose dependent | rect. | 19 | 11 |
| 32 | 65.73 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 35 | 65.77 | radiation | 1 | 4320 | > th | dose dependent | rect. | 18 | 12 |
| 36 | 65.77 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 22 |
| 48 | 65.91 | radiation | 1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 60 | 65.91 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 98 | 66.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 14 |
| 101 | 66.73 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 104 | 66.74 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 111 | 66.77 | temperature | 30 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 136 | 66.90 | temperature | 10 | 1440 | > th | dose dependent | sin | 7 | NA |
| 143 | 66.91 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 14 |
| 166 | 67.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 172 | 67.01 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 251 | 67.18 | temperature | 30 | 1440 | < th | dose dependent | sin | 8 | NA |
| 259 | 67.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 300 | 67.30 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 22 |
| 378 | 67.42 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 380 | 67.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 545 | 67.64 | temperature | 25 | 4320 | < th | dose dependent | rect. | 11 | 19 |
| 800 | 67.84 | temperature | 25 | 4320 | < th | dose dependent | sin | 15 | NA |
| 906 | 67.89 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 20 |