Os01g0284900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0284900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 204.71 | 0.672 | 8.27 | 2.2 | 3.64 | -0.947 | -0.362 | 1.41 | 0.489 | 6.86 | 20.02 | 1433 | 23.9 | 4 |
| 216.37 | 0.685 | 8.27 | 1.78 | 3.65 | -0.996 | 0.0622 | -- | 0.518 | 6.91 | 20.1 | 1411 | 22.8 | 4.99 |
| 205.05 | 0.667 | 8.27 | 2.19 | 3.64 | -0.943 | -- | 1.4 | 0.486 | 6.86 | 20.03 | 1432 | 23.9 | 4.01 |
| 216.15 | 0.685 | 8.26 | 1.8 | 3.66 | -1.02 | -- | -- | 0.511 | 6.9 | 20.16 | 1409 | 22.8 | 5 |
| 692.19 | 1.23 | 8.5 | 1.17 | -- | 1.65 | -- | 1.06 | -0.0115 | -- | 21.6 | 1094 | 3.55 | 7.22 |
| 273.07 | 0.775 | 8.41 | 1.2 | 3.58 | -- | 0.0885 | -- | 0.0199 | 6.9 | -- | -- | -- | -- |
| 273.09 | 0.774 | 8.41 | 1.2 | 3.58 | -- | -- | -- | 0.0197 | 6.9 | -- | -- | -- | -- |
| 523.62 | 1.07 | 8.25 | 2.43 | -- | -2.26 | -- | -- | 0.896 | -- | 11.1 | 22706 | 5.02 | 8.52 |
| 282.26 | 0.782 | 8.36 | -- | 3.61 | -0.672 | -- | -- | 0.229 | 6.84 | 20.23 | 1324 | 23.5 | 7.57 |
| 943.46 | 1.44 | 8.49 | 1.28 | -- | -- | -- | -- | 0.0874 | -- | -- | -- | -- | -- |
| 311.17 | 0.825 | 8.44 | -- | 3.59 | -- | -- | -- | -0.114 | 6.88 | -- | -- | -- | -- |
| 394.85 | 0.925 | 8.26 | -- | -- | -3.46 | -- | -- | 0.784 | -- | 9.563 | 6577 | 6.42 | 10.4 |
| 986.54 | 1.47 | 8.52 | -- | -- | -- | -- | -- | -0.0544 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 205.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 24 | 4 |
| 2 | 205.06 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 4 |
| 3 | 205.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 19 | 206.21 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 138 | 215.70 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 148 | 216.11 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 200 | 218.99 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 251 | 221.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 19 |
| 266 | 221.74 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 288 | 222.54 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 305 | 223.24 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 427 | 225.01 | temperature | 10 | 90 | > th | dose dependent | rect. | 6 | 14 |
| 473 | 225.38 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 17 |
| 556 | 225.91 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 562 | 225.96 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 585 | 226.10 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 591 | 226.15 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 11 |
| 614 | 226.36 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 622 | 226.39 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 13 |
| 640 | 226.48 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 659 | 226.58 | temperature | 15 | 30 | > th | dose dependent | rect. | 18 | 17 |
| 662 | 226.62 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 9 | NA |
| 695 | 226.80 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 723 | 226.94 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 806 | 227.49 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 820 | 227.57 | atmosphere | 995 | 43200 | < th | dose independent | sin | 7 | NA |
| 821 | 227.57 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 827 | 227.58 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 837 | 227.63 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 11 | 21 |
| 841 | 227.66 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 843 | 227.67 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 846 | 227.70 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 862 | 227.82 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 11 | 19 |
| 885 | 227.89 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 900 | 227.96 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 15 | 18 |
| 950 | 228.18 | temperature | 20 | 30 | > th | dose independent | rect. | 18 | 17 |
| 966 | 228.26 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 989 | 228.35 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 997 | 228.40 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 21 | 13 |