Os01g0281400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1606 domain containing protein.
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Os01g0281400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1606 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.83 | 0.252 | 12.1 | 0.695 | 0.471 | 0.44 | -0.0622 | -0.565 | 0.429 | 0.206 | 91.99 | 706 | -- | -- |
| 29.25 | 0.252 | 12.1 | 0.665 | 0.444 | 0.503 | 0.119 | -- | 0.44 | 23.7 | 92.11 | 475 | -- | -- |
| 27.61 | 0.245 | 12.1 | 0.7 | 0.402 | 0.572 | -- | -1.4 | 0.416 | 23.9 | 93.43 | 354 | -- | -- |
| 29.27 | 0.252 | 12.1 | 0.637 | 0.436 | 0.52 | -- | -- | 0.42 | 23.7 | 92.29 | 460 | -- | -- |
| 36.9 | 0.283 | 12.1 | 0.646 | -- | 0.603 | -- | -1.59 | 0.417 | -- | 93.71 | 173 | -- | -- |
| 32.35 | 0.267 | 12.1 | 0.671 | 0.414 | -- | 0.043 | -- | 0.349 | 0.981 | -- | -- | -- | -- |
| 32.36 | 0.266 | 12.1 | 0.67 | 0.414 | -- | -- | -- | 0.348 | 0.996 | -- | -- | -- | -- |
| 35.98 | 0.281 | 12.1 | 0.624 | -- | 0.388 | -- | -- | 0.427 | -- | 87.24 | 13 | -- | -- |
| 39.78 | 0.294 | 12.1 | -- | 0.431 | 0.603 | -- | -- | 0.365 | 23.4 | 92 | 413 | -- | -- |
| 43.04 | 0.307 | 12.1 | 0.685 | -- | -- | -- | -- | 0.356 | -- | -- | -- | -- | -- |
| 44.17 | 0.311 | 12.1 | -- | 0.425 | -- | -- | -- | 0.274 | 1.06 | -- | -- | -- | -- |
| 45.33 | 0.314 | 12.1 | -- | -- | 0.401 | -- | -- | 0.327 | -- | 76.03 | 6 | -- | -- |
| 55.42 | 0.347 | 12.1 | -- | -- | -- | -- | -- | 0.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.64 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 27.69 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 6 |
| 15 | 28.19 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 16 | 28.19 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 23 | 28.32 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 24 | 28.32 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 36 | 28.43 | humidity | 90.0 | 720 | > th | dose dependent | sin | 13 | NA |
| 54 | 28.53 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 1 |
| 67 | 28.61 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 6 |
| 79 | 28.65 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 92 | 28.68 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 6 |
| 97 | 28.69 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 10 |
| 106 | 28.69 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 117 | 28.72 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 135 | 28.75 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 1 | 11 |
| 167 | 28.80 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 1 | 7 |
| 191 | 28.83 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 22 | 7 |
| 203 | 28.85 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 233 | 28.89 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 5 | 21 |
| 254 | 28.93 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 277 | 28.96 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 342 | 29.05 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 7 | 19 |
| 344 | 29.05 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 9 | 21 |
| 355 | 29.06 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 9 | 18 |
| 375 | 29.08 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 382 | 29.09 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 412 | 29.12 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 441 | 29.15 | humidity | 90.0 | 720 | > th | dose dependent | no | NA | NA |
| 447 | 29.16 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 450 | 29.16 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 468 | 29.18 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 482 | 29.20 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 22 | 8 |
| 486 | 29.21 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 492 | 29.22 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 12 |
| 505 | 29.25 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 509 | 29.25 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 20 |
| 527 | 29.27 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 16 |
| 539 | 29.29 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 552 | 29.30 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 559 | 29.30 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 579 | 29.32 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 13 |
| 591 | 29.33 | wind | 3.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 619 | 29.36 | humidity | 80.0 | 1440 | > th | dose independent | sin | 23 | NA |
| 632 | 29.38 | humidity | 80.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 640 | 29.38 | humidity | 90.0 | 720 | > th | dose independent | rect. | 19 | 13 |
| 669 | 29.40 | humidity | 90.0 | 30 | > th | dose dependent | sin | 5 | NA |
| 710 | 29.44 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 24 | 8 |
| 913 | 29.53 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 959 | 29.55 | humidity | 90.0 | 30 | > th | dose independent | rect. | 1 | 6 |