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Os01g0266800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cystinosin/ERS1p repeat containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0451) R2 : 0.906
β1 : -1.81 (0.207) R2dD : 0.0274 R2D : 0.0624
β2 : 6.91 (0.114) R2dC : 0.788 R2C : 0.705
β3 : -2.3 (0.166) R2dE : 0.074 R2E : 0.0701
β4 : 5.65 (0.494) R2dD*C : 0.0272 R2D*C : 0.0245
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.752 (0.105) R2dN8 : 0.018 R2N8 : 0.0165
σ : 0.813
deviance : 305
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C
peak time of C : 7.42
E
wheather : temperature
threshold : 20.1
memory length : 4152
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 21.2
open length of G : 1.07

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
305.33 0.821 10.8 -1.8 6.91 -2.28 5.66 0.109 -0.749 7.42 20.09 4154 21.1 1.17
305 0.813 10.8 -1.81 6.91 -2.3 5.65 -- -0.752 7.42 20.1 4152 21.2 1.07
390.95 0.921 10.8 -1.51 6.9 -2.21 -- 0.805 -0.735 7.39 20.1 4154 21.2 0.858
392.38 0.923 10.8 -1.57 6.95 -2.39 -- -- -0.722 7.38 20.03 4154 21.2 0.9
2739.68 2.45 11.1 -3.54 -- -4.79 -- -9.71 -1.08 -- 16.83 46347 20.6 1.38
434 0.977 11 -3.64 6.63 -- 5.89 -- -1.44 7.44 -- -- -- --
529.31 1.08 11 -3.5 6.64 -- -- -- -1.45 7.43 -- -- -- --
1345.15 1.72 11.2 -3.4 -- -3.85 -- -- -1.51 -- -66.14 47520 16.3 7.75
435.03 0.971 10.9 -- 6.74 -2.78 -- -- -0.656 7.35 19.94 4245 21.3 0.501
2878.57 2.51 11.1 -3.4 -- -- -- -- -1.35 -- -- -- -- --
852.88 1.37 10.9 -- 6.61 -- -- -- -1.06 7.46 -- -- -- --
1344.33 1.71 11.1 -- -- -4.13 -- -- -1.35 -- -62.87 47520 15.8 8.79
3183.2 2.63 11.1 -- -- -- -- -- -0.969 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 319.83 temperature 20 4320 > th dose independent rect. 21 1
2 320.35 temperature 20 1440 > th dose independent rect. 21 10
3 320.48 temperature 20 1440 < th dose independent rect. 21 7
4 320.52 temperature 20 1440 > th dose independent rect. 21 7
5 320.52 temperature 20 1440 < th dose independent rect. 21 9
30 322.28 temperature 20 1440 > th dose independent rect. 23 2
35 322.48 temperature 20 1440 < th dose independent rect. 23 2
36 322.51 temperature 20 4320 < th dose independent rect. 21 1
56 323.30 temperature 20 1440 > th dose independent rect. 5 2
67 323.74 temperature 20 1440 < th dose independent rect. 5 1
118 326.76 temperature 20 1440 < th dose independent rect. 3 1
163 329.21 temperature 20 1440 > th dose independent sin 10 NA
172 329.76 temperature 20 1440 < th dose independent sin 10 NA
197 331.04 temperature 15 1440 > th dose dependent rect. 2 1
198 331.16 temperature 25 1440 < th dose dependent rect. 2 1
232 332.96 temperature 25 1440 < th dose dependent rect. 24 4
245 333.55 temperature 15 10 > th dose dependent rect. 14 12
302 335.38 temperature 10 270 > th dose dependent rect. 11 13
319 335.72 temperature 20 10 > th dose independent rect. 14 12
331 336.13 temperature 20 270 > th dose independent rect. 12 12
704 342.46 temperature 15 1440 > th dose dependent rect. 5 1
708 342.52 temperature 25 1440 < th dose dependent rect. 5 1
726 342.69 temperature 25 1440 < th dose dependent sin 10 NA
796 343.72 temperature 25 1440 < th dose dependent rect. 21 1