BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0266800 Os01g0266800|AK069474
         (420 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0266800  Cystinosin/ERS1p repeat containing protein          818   0.0  
AK110730                                                           91   2e-18

>Os01g0266800 Cystinosin/ERS1p repeat containing protein
          Length = 420

 Score =  818 bits (2113), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/420 (94%), Positives = 398/420 (94%)

Query: 1   MGIFSGAGAHRPSCPSAANCAKWAQTYLKYCLCSTRDGMALTLGLLSVISWGVAEVPQII 60
           MGIFSGAGAHRPSCPSAANCAKWAQTYLKYCLCSTRDGMALTLGLLSVISWGVAEVPQII
Sbjct: 1   MGIFSGAGAHRPSCPSAANCAKWAQTYLKYCLCSTRDGMALTLGLLSVISWGVAEVPQII 60

Query: 61  TNYKHKSTEGLSLAFLMTWIVGDFFNLIGCFLEPETLPTQFYMALLYTITTVILTGQTVY 120
           TNYKHKSTEGLSLAFLMTWIVGDFFNLIGCFLEPETLPTQFYMALLYTITTVILTGQTVY
Sbjct: 61  TNYKHKSTEGLSLAFLMTWIVGDFFNLIGCFLEPETLPTQFYMALLYTITTVILTGQTVY 120

Query: 121 YSHIYHRLKAKKARATSKPQRHQRADASLREKLLGPKVIGEIRNNSHLGATVPIPTSSPI 180
           YSHIYHRLKAKKARATSKPQRHQRADASLREKLLGPKVIGEIRNNSHLGATVPIPTSSPI
Sbjct: 121 YSHIYHRLKAKKARATSKPQRHQRADASLREKLLGPKVIGEIRNNSHLGATVPIPTSSPI 180

Query: 181 TVNTEIVRQRHGPSSLSEYYYTSARSLSSSPVPMSGTWSANYHQTNSPPEIDDQKESLVS 240
           TVNTEIVRQRHGPSSLSEYYYTSARSLSSSPVPMSGTWSANYHQTNSPPEIDDQKESLVS
Sbjct: 181 TVNTEIVRQRHGPSSLSEYYYTSARSLSSSPVPMSGTWSANYHQTNSPPEIDDQKESLVS 240

Query: 241 EFSPAQYAASPLIKNSLSVVPWMSLLLGMSVLHFLVGTTHQEVPNGIVIPVGXXXXXXAD 300
           EFSPAQYAASPLIKNSLSVVPWMSLLLGMSVLHFLVGTTHQEVPNGIVIPVG      AD
Sbjct: 241 EFSPAQYAASPLIKNSLSVVPWMSLLLGMSVLHFLVGTTHQEVPNGIVIPVGRRLLLLAD 300

Query: 301 DHADXXXXXXXXXXXXXXXXWAMAVIYMGGRLPQIWLNMKRGNAEGLNPLMFTFALVGNV 360
           DHAD                WAMAVIYMGGRLPQIWLNMKRGNAEGLNPLMFTFALVGNV
Sbjct: 301 DHADSSVSNGSGSGIGSFLGWAMAVIYMGGRLPQIWLNMKRGNAEGLNPLMFTFALVGNV 360

Query: 361 TYVGSILVKSMDWSKLKPNLPWLVDAGGCVLLDTFIILQFLYFHYRKRHVPDEPDSADKV 420
           TYVGSILVKSMDWSKLKPNLPWLVDAGGCVLLDTFIILQFLYFHYRKRHVPDEPDSADKV
Sbjct: 361 TYVGSILVKSMDWSKLKPNLPWLVDAGGCVLLDTFIILQFLYFHYRKRHVPDEPDSADKV 420



>AK110730 
          Length = 329

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 153/370 (41%), Gaps = 77/370 (20%)

Query: 36  RDGMALTLGLLSVISWGVAEVPQIITNYKHKSTEGLSLAFLMTWIVGDFFNLIGCFLEPE 95
           R+  +  LG +S+  W    VPQ+I NY++ + E +SL F+  W  GD  NL+   L   
Sbjct: 26  REAASGVLGSVSMTCWIFLLVPQLIENYRNGNAEAISLLFVFVWFAGDVANLL-GGLLAG 84

Query: 96  TLPTQFYMALLYTITTVILTGQTVYYSHIYHRLKAKKARATSKPQRHQRADASLREKLLG 155
            +P    +A+ + I   IL GQ +YY       K K  RA+S P+R    +         
Sbjct: 85  LVPVILSIAVYFCIADGILIGQCLYY-------KIKNTRASSHPRRRSSTE--------- 128

Query: 156 PKVIGEIRNNSHLGATVPIPTSSPITVNTEIVRQRHGPSSLSEYYYTSARSLSSSPVPMS 215
                            P PT       T ++ +R   S        S +    S   + 
Sbjct: 129 ----------------TPDPT-------TPLLGRRFSDS------LASGQGRRRSSGSLR 159

Query: 216 GTWSANYHQTNSPPEIDDQKESLVSEFSPAQYAASPLIKNSLSVVPWMSLLLGMSVLHFL 275
           G  +A   ++    +++D    +V E    +Y     +KN+LSV       LG+    FL
Sbjct: 160 GYQAAGRRES----QVEDPLAKIVEE---NEYGRKAWVKNTLSV-------LGI----FL 201

Query: 276 VGTTHQEVP--NGIVIPVGXXXXXXADDHADXXXXXXXXXXXXXXXXWAMAVIYMGGRLP 333
           VG     V    G+  P         D+                   +A AV+Y+G RLP
Sbjct: 202 VGAAGWTVAWRTGMWAPAPQEIPHAPDEATGGQILG-----------YASAVLYLGARLP 250

Query: 334 QIWLNMKRGNAEGLNPLMFTFALVGNVTYVGSILVKSMDWSKLKPNLPWLVDAGGCVLLD 393
           QI+ N    + EGL+ L F  +L+GN+TY   I+  S +   +  N+PWL+ + G ++ D
Sbjct: 251 QIYKNYCDKSCEGLSLLFFILSLLGNLTYGAGIIAHSTEREYIITNIPWLIGSLGTMVED 310

Query: 394 TFIILQFLYF 403
             I  QF  +
Sbjct: 311 VTIFAQFRIY 320



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.135    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,475,693
Number of extensions: 592655
Number of successful extensions: 1364
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1361
Number of HSP's successfully gapped: 3
Length of query: 420
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 317
Effective length of database: 11,657,759
Effective search space: 3695509603
Effective search space used: 3695509603
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)