Os01g0266500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phenazine biosynthesis PhzC/PhzF protein family protein.
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Os01g0266500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phenazine biosynthesis PhzC/PhzF protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.13 | 0.431 | 11 | -1.6 | 0.0787 | -1.36 | 1.18 | 0.881 | -0.165 | 7.67 | 28.11 | 23 | -- | -- |
| 85.04 | 0.429 | 11 | -1.49 | 0.0812 | -1.42 | 1.28 | -- | -0.129 | 6.89 | 27.86 | 24 | -- | -- |
| 85.97 | 0.432 | 11 | -1.53 | 0.286 | -1.27 | -- | 0.813 | -0.13 | 11.9 | 25.7 | 191 | -- | -- |
| 86.89 | 0.434 | 11 | -1.43 | 0.256 | -1.37 | -- | -- | -0.132 | 11.7 | 25.68 | 177 | -- | -- |
| 88.46 | 0.438 | 11 | -1.51 | -- | -1.4 | -- | 0.642 | -0.159 | -- | 27.23 | 98 | -- | -- |
| 112.86 | 0.498 | 10.9 | -1.08 | 0.465 | -- | 0.018 | -- | 0.171 | 13.5 | -- | -- | -- | -- |
| 112.86 | 0.497 | 10.9 | -1.08 | 0.465 | -- | -- | -- | 0.171 | 13.5 | -- | -- | -- | -- |
| 89.27 | 0.44 | 11 | -1.44 | -- | -1.42 | -- | -- | -0.142 | -- | 27.09 | 95 | -- | -- |
| 134.42 | 0.54 | 10.9 | -- | 0.346 | -0.755 | -- | -- | 0.166 | 13 | 25.5 | 165 | -- | -- |
| 126.09 | 0.525 | 10.9 | -1.1 | -- | -- | -- | -- | 0.161 | -- | -- | -- | -- | -- |
| 143.71 | 0.561 | 10.9 | -- | 0.484 | -- | -- | -- | 0.292 | 13.6 | -- | -- | -- | -- |
| 138.38 | 0.55 | 11 | -- | -- | -0.957 | -- | -- | 0.107 | -- | 27.7 | 56 | -- | -- |
| 158.03 | 0.587 | 10.9 | -- | -- | -- | -- | -- | 0.283 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.16 | temperature | 30 | 30 | < th | dose dependent | sin | 6 | NA |
| 3 | 82.49 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 4 | 82.49 | temperature | 10 | 30 | > th | dose dependent | sin | 6 | NA |
| 7 | 82.56 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 13 | 82.93 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 15 | 83.01 | temperature | 25 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 18 | 83.09 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 20 | 83.17 | wind | 3 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 21 | 83.19 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 24 | 83.36 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 34 | 83.56 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 40 | 83.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 22 |
| 77 | 84.39 | temperature | 15 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 84 | 84.47 | temperature | 30 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 92 | 84.59 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 112 | 84.76 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 119 | 84.84 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 131 | 84.94 | wind | 5 | 14400 | < th | dose independent | rect. | 20 | 18 |
| 138 | 84.98 | wind | 5 | 14400 | > th | dose independent | rect. | 20 | 18 |
| 150 | 85.05 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 152 | 85.06 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 159 | 85.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 168 | 85.22 | temperature | 10 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 174 | 85.26 | temperature | 10 | 4320 | > th | dose dependent | rect. | 7 | 11 |
| 232 | 85.48 | wind | 5 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 244 | 85.53 | wind | 5 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 253 | 85.55 | temperature | 10 | 4320 | > th | dose dependent | rect. | 12 | 2 |
| 261 | 85.56 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 272 | 85.58 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 289 | 85.63 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 291 | 85.63 | temperature | 10 | 4320 | > th | dose dependent | rect. | 12 | 6 |
| 343 | 85.76 | temperature | 10 | 4320 | > th | dose dependent | sin | 23 | NA |
| 376 | 85.84 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 387 | 85.86 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 406 | 85.88 | temperature | 15 | 30 | > th | dose dependent | rect. | 4 | 23 |
| 408 | 85.89 | wind | 5 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 432 | 85.92 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 456 | 85.99 | wind | 5 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 464 | 86.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 500 | 86.07 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 18 |
| 516 | 86.10 | temperature | 30 | 4320 | < th | dose dependent | rect. | 7 | 13 |
| 599 | 86.24 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 672 | 86.33 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 674 | 86.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 799 | 86.48 | wind | 5 | 14400 | > th | dose dependent | rect. | 20 | 19 |
| 841 | 86.53 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 863 | 86.55 | temperature | 30 | 4320 | < th | dose dependent | sin | 23 | NA |
| 873 | 86.56 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 902 | 86.58 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 18 |