Os01g0249900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF573 family protein.
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Os01g0249900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF573 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.21 | 0.544 | 4.97 | -0.51 | 0.266 | -0.314 | 0.84 | 1.76 | -0.411 | 12.4 | 20.95 | 975 | -- | -- |
| 134.71 | 0.541 | 5.05 | -0.824 | 0.249 | -1.11 | 0.614 | -- | -0.527 | 13.7 | 17.9 | 752 | -- | -- |
| 136.87 | 0.545 | 4.97 | -0.45 | 0.283 | -0.272 | -- | 1.75 | -0.404 | 12.4 | 21.2 | 1143 | -- | -- |
| 134.96 | 0.541 | 5.03 | -0.801 | 0.22 | -1.19 | -- | -- | -0.508 | 12.8 | 18 | 757 | -- | -- |
| 141.16 | 0.553 | 4.97 | -0.505 | -- | -0.378 | -- | 1.52 | -0.405 | -- | 21.2 | 1001 | -- | -- |
| 148.1 | 0.571 | 5.05 | -1.07 | 0.325 | -- | 0.362 | -- | -0.612 | 12.5 | -- | -- | -- | -- |
| 148.66 | 0.571 | 5.05 | -1.06 | 0.324 | -- | -- | -- | -0.611 | 12.5 | -- | -- | -- | -- |
| 137.78 | 0.547 | 5.03 | -0.782 | -- | -1.31 | -- | -- | -0.501 | -- | 17.99 | 758 | -- | -- |
| 148.73 | 0.568 | 4.99 | -- | 0.198 | -1.36 | -- | -- | -0.377 | 12.7 | 18.53 | 775 | -- | -- |
| 155.26 | 0.582 | 5.05 | -1.07 | -- | -- | -- | -- | -0.616 | -- | -- | -- | -- | -- |
| 178.2 | 0.624 | 5.02 | -- | 0.34 | -- | -- | -- | -0.493 | 12.7 | -- | -- | -- | -- |
| 151.06 | 0.572 | 5 | -- | -- | -1.45 | -- | -- | -0.37 | -- | 18.55 | 775 | -- | -- |
| 185.46 | 0.636 | 5.03 | -- | -- | -- | -- | -- | -0.497 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 122.64 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 3 |
| 2 | 122.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 3 | 122.78 | temperature | 25 | 270 | < th | dose independent | rect. | 8 | 3 |
| 4 | 122.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 5 |
| 32 | 126.09 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 10 |
| 34 | 126.33 | temperature | 20 | 720 | < th | dose independent | rect. | 2 | 8 |
| 38 | 126.43 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 7 |
| 54 | 126.73 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 55 | 126.92 | temperature | 20 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 61 | 127.09 | temperature | 20 | 720 | > th | dose independent | rect. | 24 | 13 |
| 65 | 127.15 | temperature | 20 | 720 | > th | dose independent | sin | 6 | NA |
| 96 | 127.55 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 98 | 127.57 | temperature | 20 | 720 | < th | dose independent | sin | 6 | NA |
| 108 | 127.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 3 |
| 209 | 128.89 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 2 |
| 232 | 129.09 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 255 | 129.22 | temperature | 25 | 720 | < th | dose dependent | sin | 5 | NA |
| 263 | 129.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 277 | 129.40 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 13 | 14 |
| 293 | 129.53 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 13 | 19 |
| 300 | 129.58 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 12 | 17 |
| 320 | 129.70 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 15 |
| 333 | 129.77 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 16 | NA |
| 386 | 130.15 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 15 |
| 454 | 130.54 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 509 | 130.83 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 525 | 130.96 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 594 | 131.28 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 19 |
| 642 | 131.55 | wind | 1 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 680 | 131.68 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 8 |
| 686 | 131.70 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 10 |
| 715 | 131.80 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 739 | 131.91 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 795 | 132.10 | atmosphere | 995 | 43200 | > th | dose independent | sin | 6 | NA |
| 875 | 132.40 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 14 |
| 973 | 132.72 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 982 | 132.74 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 985 | 132.75 | wind | 5 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 994 | 132.77 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 7 |
| 998 | 132.77 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 10 |