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Os01g0242300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Optic atrophy 3 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.26 (0.0232) R2 : 0.603
β1 : -2.11 (0.0849) R2dD : 0.556 R2D : 0.396
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.66 (0.0495) R2dN8 : 0.207 R2N8 : 0.0467
σ : 0.435
deviance : 86.68
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
65.36 0.38 8.26 -2.08 0.517 0.462 0.621 0.633 -0.715 7.83 21.64 4204 -- --
65.7 0.378 8.26 -2.1 0.521 0.472 0.654 -- -0.71 7.78 24.3 4231 -- --
66.17 0.379 8.26 -2.05 0.513 0.461 -- 0.604 -0.707 8 24.64 4201 -- --
66.7 0.38 8.25 -2.1 0.516 0.488 -- -- -0.706 7.95 24.03 4210 -- --
80.13 0.417 8.26 -2.02 -- 0.425 -- 0.606 -0.687 -- 24.63 4331 -- --
72.03 0.398 8.25 -2.13 0.501 -- 0.658 -- -0.667 7.5 -- -- -- --
73.19 0.401 8.25 -2.11 0.5 -- -- -- -0.667 7.7 -- -- -- --
80.56 0.418 8.27 -2.09 -- 0.479 -- -- -0.717 -- 23.61 4308 -- --
143.76 0.558 8.17 -- 0.638 0.891 -- -- -0.427 8.04 30 35906 -- --
86.68 0.435 8.26 -2.11 -- -- -- -- -0.66 -- -- -- -- --
190.96 0.646 8.2 -- 0.485 -- -- -- -0.432 8 -- -- -- --
114.28 0.498 8.13 -- -- 1.51 -- -- -0.0582 -- 59.9 47520 -- --
203.82 0.666 8.21 -- -- -- -- -- -0.426 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 61.21 radiation 1.0 10 > th dose independent sin 10 NA
7 62.19 atmosphere 1000.0 10 > th dose independent rect. 23 6
8 62.38 radiation 1.0 10 < th dose dependent rect. 23 18
11 62.50 radiation 1.0 10 < th dose dependent sin 10 NA
16 62.68 radiation 1.0 10 < th dose independent rect. 23 18
18 62.74 atmosphere 1000.0 270 > th dose independent rect. 8 19
19 62.82 atmosphere 995.0 10 > th dose dependent rect. 23 6
21 62.85 atmosphere 995.0 10 > th dose independent rect. 10 19
27 63.00 wind 9.0 10 < th dose independent rect. 10 19
28 63.01 radiation 1.0 10 < th dose independent sin 10 NA
29 63.01 radiation 1.0 10 > th dose independent rect. 18 16
30 63.02 radiation 1.0 10 > th dose independent rect. 5 5
41 63.03 radiation 1.0 10 < th dose dependent rect. 23 15
45 63.14 radiation 1.0 10 < th dose dependent rect. 23 7
46 63.14 atmosphere 995.0 10 > th dose dependent rect. 10 19
47 63.15 precipitation 0.1 10 < th dose independent rect. 5 5
48 63.15 precipitation 0.1 10 < th dose dependent rect. 5 5
52 63.19 humidity 60.0 10 > th dose independent rect. 5 5
55 63.20 radiation 1.0 10 < th dose dependent rect. 23 9
59 63.21 wind 9.0 10 < th dose independent rect. 5 5
60 63.21 temperature 10.0 10 > th dose independent rect. 5 5
63 63.21 atmosphere 995.0 10 > th dose independent rect. 5 5
64 63.21 atmosphere 1015.0 10 < th dose independent rect. 5 5
65 63.21 temperature 10.0 10 > th dose independent rect. 10 19
73 63.27 wind 9.0 10 < th dose dependent rect. 5 5
74 63.28 temperature 10.0 10 > th dose dependent rect. 23 6
75 63.30 radiation 1.0 10 < th dose independent rect. 23 15
77 63.33 radiation 40.0 10 < th dose independent rect. 5 5
78 63.33 temperature 20.0 10 > th dose independent rect. 23 6
79 63.33 humidity 80.0 10 > th dose independent rect. 23 6
84 63.40 humidity 50.0 10 > th dose dependent rect. 23 6
85 63.41 radiation 1.0 10 < th dose independent rect. 23 7
90 63.46 precipitation 0.1 10 < th dose independent rect. 5 18
95 63.46 precipitation 0.1 10 < th dose dependent rect. 5 18
97 63.48 precipitation 0.1 270 < th dose independent rect. 3 4
98 63.48 radiation 1.0 10 < th dose independent rect. 23 9
104 63.48 precipitation 0.1 270 < th dose dependent rect. 3 4
116 63.57 temperature 30.0 10 < th dose independent rect. 5 5
119 63.60 wind 9.0 270 < th dose independent rect. 7 20
120 63.60 radiation 30.0 14400 > th dose dependent rect. 10 1
130 63.65 temperature 10.0 10 > th dose dependent rect. 5 5
134 63.69 wind 9.0 10 < th dose independent rect. 23 6
135 63.69 temperature 10.0 10 > th dose independent rect. 23 6
136 63.69 temperature 30.0 10 < th dose independent rect. 23 6
137 63.69 humidity 50.0 10 > th dose independent rect. 23 6
146 63.69 atmosphere 1000.0 10 > th dose independent rect. 21 8
147 63.69 temperature 10.0 10 > th dose independent rect. 5 18
149 63.69 atmosphere 1015.0 10 < th dose independent rect. 5 18
154 63.71 wind 7.0 270 < th dose independent rect. 3 4
167 63.72 radiation 1.0 43200 < th dose dependent rect. 24 4
171 63.77 atmosphere 1000.0 10 > th dose independent rect. 19 10
173 63.78 radiation 40.0 14400 > th dose independent rect. 10 1
175 63.79 temperature 10.0 270 > th dose independent rect. 3 4
177 63.79 temperature 30.0 270 < th dose independent rect. 3 4
178 63.79 humidity 50.0 270 > th dose independent rect. 3 4
180 63.79 atmosphere 995.0 270 > th dose independent rect. 3 4
181 63.79 atmosphere 1015.0 270 < th dose independent rect. 3 4
182 63.79 radiation 30.0 270 < th dose independent rect. 3 4
184 63.79 temperature 25.0 270 < th dose independent rect. 2 7
185 63.79 temperature 10.0 270 > th dose independent rect. 7 20
186 63.79 wind 9.0 270 < th dose dependent rect. 3 4
187 63.80 radiation 40.0 14400 < th dose independent rect. 10 1
196 63.82 radiation 1.0 270 > th dose independent rect. 4 2
210 63.82 precipitation 0.1 10 < th dose independent rect. 10 19
211 63.82 precipitation 0.1 10 < th dose dependent rect. 10 19
217 63.85 humidity 50.0 10 > th dose independent rect. 10 19
219 63.86 wind 1.0 14400 < th dose independent rect. 1 1
222 63.86 atmosphere 1000.0 270 > th dose independent rect. 21 6
239 63.89 radiation 40.0 270 < th dose dependent rect. 3 5
256 63.93 wind 9.0 10 < th dose independent rect. 5 18
258 63.95 atmosphere 1000.0 270 > th dose independent rect. 23 2
259 63.96 precipitation 0.1 270 < th dose independent rect. 8 19
261 63.96 precipitation 0.1 270 < th dose dependent rect. 8 19
268 63.99 atmosphere 1005.0 10 > th dose independent rect. 5 4
271 63.99 atmosphere 995.0 10 > th dose dependent rect. 5 5
296 64.04 atmosphere 995.0 270 > th dose dependent rect. 23 2
307 64.08 radiation 1.0 10 < th dose dependent rect. 19 22
326 64.11 radiation 1.0 10 < th dose dependent rect. 21 20
341 64.13 atmosphere 1000.0 270 > th dose independent rect. 6 23
389 64.24 radiation 40.0 14400 < th dose dependent rect. 10 1
416 64.26 atmosphere 995.0 270 > th dose dependent rect. 21 6
423 64.27 atmosphere 995.0 10 > th dose dependent rect. 19 10
437 64.29 wind 1.0 43200 > th dose independent rect. 2 2
495 64.34 radiation 40.0 10 < th dose independent rect. 10 19
511 64.37 atmosphere 995.0 10 > th dose dependent rect. 21 8
517 64.39 wind 1.0 90 > th dose independent rect. 9 20
520 64.40 precipitation 0.1 10 < th dose independent rect. 23 6
521 64.40 radiation 1.0 10 < th dose independent rect. 21 20
522 64.40 precipitation 0.1 10 < th dose dependent rect. 23 6
548 64.41 humidity 50.0 10 > th dose dependent rect. 5 5
579 64.42 wind 1.0 43200 > th dose independent rect. 2 4
604 64.43 humidity 50.0 10 > th dose dependent rect. 10 19
616 64.44 wind 1.0 43200 < th dose dependent rect. 2 4
625 64.45 wind 1.0 43200 < th dose dependent rect. 4 2
629 64.46 wind 9.0 270 < th dose dependent rect. 5 1
630 64.46 humidity 50.0 10 > th dose dependent rect. 19 10
643 64.48 wind 1.0 43200 < th dose independent rect. 2 4
682 64.52 wind 1.0 270 < th dose independent rect. 4 1
719 64.53 wind 9.0 270 < th dose independent rect. 6 23
721 64.53 radiation 40.0 10 < th dose dependent rect. 5 5
722 64.53 wind 9.0 10 < th dose dependent rect. 23 6
723 64.53 radiation 10.0 14400 < th dose dependent rect. 8 6
744 64.55 atmosphere 1015.0 270 < th dose independent rect. 12 10
746 64.55 radiation 1.0 10 < th dose independent rect. 19 22
763 64.56 precipitation 0.1 270 < th dose independent rect. 5 1
785 64.56 precipitation 0.1 270 < th dose dependent rect. 5 1
829 64.59 radiation 30.0 14400 > th dose independent sin 9 NA
830 64.59 wind 7.0 270 < th dose independent rect. 5 1
832 64.59 temperature 10.0 270 > th dose independent rect. 5 1
834 64.59 temperature 30.0 270 < th dose independent rect. 5 1
835 64.59 humidity 50.0 270 > th dose independent rect. 5 1
838 64.59 atmosphere 995.0 270 > th dose independent rect. 5 1
839 64.59 atmosphere 1015.0 270 < th dose independent rect. 5 1
840 64.59 radiation 20.0 270 < th dose independent rect. 5 1
853 64.59 temperature 10.0 270 > th dose independent rect. 6 23
911 64.63 atmosphere 1005.0 270 > th dose independent rect. 5 1
912 64.63 humidity 50.0 10 > th dose independent rect. 5 18
919 64.64 temperature 10.0 270 > th dose dependent rect. 5 1
920 64.64 radiation 10.0 4320 < th dose dependent rect. 12 1
934 64.64 radiation 1.0 10 < th dose dependent rect. 21 23
962 64.67 radiation 10.0 14400 > th dose independent rect. 8 5
967 64.67 temperature 10.0 10 > th dose dependent rect. 5 18
975 64.68 radiation 1.0 270 > th dose dependent rect. 5 1
994 64.70 radiation 30.0 14400 < th dose independent sin 8 NA