Os01g0229500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phenylacetic acid degradation-related protein domain containing protein.
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Os01g0229500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phenylacetic acid degradation-related protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.86 | 0.525 | 8.11 | -1.94 | 0.822 | 1.81 | 0.703 | -1.53 | -0.571 | 9.12 | 9.283 | 7434 | -- | -- |
| 124.06 | 0.519 | 8.09 | -1.91 | 0.825 | 2 | 0.843 | -- | -0.629 | 9.17 | 12.36 | 11354 | -- | -- |
| 126.55 | 0.524 | 8.11 | -1.91 | 0.822 | 1.81 | -- | -1.52 | -0.569 | 9.22 | 9.063 | 7467 | -- | -- |
| 125.62 | 0.522 | 8.08 | -1.86 | 0.816 | 1.98 | -- | -- | -0.613 | 9.36 | 12.12 | 11331 | -- | -- |
| 163.21 | 0.595 | 8.14 | -2.01 | -- | 1.89 | -- | -0.66 | -0.656 | -- | 6.887 | 11573 | -- | -- |
| 188.15 | 0.643 | 7.94 | -0.631 | 0.804 | -- | 0.671 | -- | 0.0378 | 8.95 | -- | -- | -- | -- |
| 189.66 | 0.645 | 7.94 | -0.607 | 0.8 | -- | -- | -- | 0.0389 | 9.07 | -- | -- | -- | -- |
| 163.63 | 0.596 | 8.11 | -1.87 | -- | 1.96 | -- | -- | -0.619 | -- | 9.556 | 11574 | -- | -- |
| 165.01 | 0.598 | 7.94 | -- | 0.816 | 0.854 | -- | -- | 0.0394 | 9.51 | 26.4 | 5906 | -- | -- |
| 226.55 | 0.703 | 7.96 | -0.609 | -- | -- | -- | -- | 0.0435 | -- | -- | -- | -- | -- |
| 199.38 | 0.661 | 7.92 | -- | 0.8 | -- | -- | -- | 0.107 | 9.13 | -- | -- | -- | -- |
| 201.45 | 0.661 | 7.98 | -- | -- | 0.833 | -- | -- | -0.0708 | -- | 26.7 | 7268 | -- | -- |
| 236.33 | 0.718 | 7.94 | -- | -- | -- | -- | -- | 0.111 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.07 | humidity | 80 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 3 | 119.29 | humidity | 80 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 17 | 120.18 | humidity | 80 | 14400 | > th | dose dependent | sin | 17 | NA |
| 20 | 120.32 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 21 | 120.32 | humidity | 80 | 14400 | > th | dose dependent | rect. | 13 | 11 |
| 23 | 120.33 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 30 | 120.43 | humidity | 80 | 14400 | > th | dose dependent | rect. | 17 | 7 |
| 47 | 120.62 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 13 |
| 63 | 120.77 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 79 | 120.84 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 21 |
| 98 | 121.16 | temperature | 10 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 99 | 121.17 | humidity | 70 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 135 | 121.50 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 149 | 121.66 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 158 | 121.70 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 233 | 122.08 | humidity | 80 | 14400 | > th | dose dependent | rect. | 1 | 22 |
| 260 | 122.19 | humidity | 80 | 14400 | > th | dose independent | sin | 21 | NA |
| 363 | 122.60 | humidity | 80 | 14400 | > th | dose dependent | rect. | 17 | 22 |
| 372 | 122.65 | humidity | 80 | 14400 | < th | dose independent | sin | 21 | NA |
| 373 | 122.65 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 382 | 122.68 | humidity | 80 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 388 | 122.70 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 390 | 122.71 | humidity | 90 | 14400 | < th | dose independent | rect. | 12 | 13 |
| 396 | 122.74 | humidity | 80 | 14400 | > th | dose dependent | no | NA | NA |
| 404 | 122.76 | humidity | 90 | 14400 | < th | dose independent | rect. | 10 | 16 |
| 413 | 122.79 | wind | 1 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 451 | 122.91 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 18 |
| 487 | 123.03 | wind | 3 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 532 | 123.16 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 21 |
| 542 | 123.20 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 14 |
| 571 | 123.26 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 580 | 123.29 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 6 |
| 614 | 123.41 | humidity | 90 | 14400 | < th | dose independent | sin | 17 | NA |
| 630 | 123.44 | humidity | 80 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 646 | 123.49 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 21 |
| 662 | 123.53 | humidity | 60 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 671 | 123.56 | wind | 9 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 689 | 123.61 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 764 | 123.80 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 773 | 123.82 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 805 | 123.89 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 7 |
| 813 | 123.90 | temperature | 10 | 14400 | > th | dose dependent | sin | 20 | NA |
| 869 | 124.05 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 915 | 124.15 | humidity | 90 | 14400 | > th | dose independent | sin | 17 | NA |
| 946 | 124.22 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 3 |