Os01g0228800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0228800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.93 | 0.204 | 9.58 | 0.00123 | 0.855 | 1 | -0.0778 | 0.335 | 0.185 | 3.73 | 21.1 | 5261 | -- | -- |
| 19.11 | 0.204 | 9.6 | -0.0391 | 0.862 | 0.963 | 0.00231 | -- | 0.169 | 3.69 | 21.2 | 5251 | -- | -- |
| 18.95 | 0.203 | 9.58 | 0.00173 | 0.855 | 1 | -- | 0.331 | 0.185 | 3.74 | 21.1 | 5253 | -- | -- |
| 19.07 | 0.203 | 9.6 | -0.0424 | 0.857 | 0.943 | -- | -- | 0.17 | 3.72 | 21.19 | 5254 | -- | -- |
| 58.76 | 0.357 | 9.59 | 0.0632 | -- | 1 | -- | 0.279 | 0.207 | -- | 21.2 | 3963 | -- | -- |
| 36.99 | 0.285 | 9.53 | 0.545 | 0.881 | -- | -0.122 | -- | 0.473 | 3.6 | -- | -- | -- | -- |
| 37.04 | 0.285 | 9.53 | 0.547 | 0.881 | -- | -- | -- | 0.473 | 3.6 | -- | -- | -- | -- |
| 58.74 | 0.357 | 9.6 | 0.0269 | -- | 0.938 | -- | -- | 0.188 | -- | 21.37 | 3950 | -- | -- |
| 19.12 | 0.204 | 9.6 | -- | 0.864 | 0.918 | -- | -- | 0.18 | 3.72 | 21.1 | 5254 | -- | -- |
| 80.2 | 0.418 | 9.53 | 0.584 | -- | -- | -- | -- | 0.497 | -- | -- | -- | -- | -- |
| 44.92 | 0.314 | 9.54 | -- | 0.891 | -- | -- | -- | 0.412 | 3.6 | -- | -- | -- | -- |
| 58.75 | 0.357 | 9.6 | -- | -- | 0.95 | -- | -- | 0.181 | -- | 21.34 | 3950 | -- | -- |
| 89.18 | 0.441 | 9.55 | -- | -- | -- | -- | -- | 0.432 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.10 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 2 | 18.11 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 3 | 18.14 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 4 | 18.23 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 7 | 18.23 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 15 | 18.24 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 18 | 18.24 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 24 | 18.29 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 27 | 18.46 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 38 | 18.50 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 73 | 18.68 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 79 | 18.74 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 82 | 18.77 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 84 | 18.81 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 86 | 18.81 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 5 | 7 |
| 114 | 18.93 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 119 | 18.94 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 120 | 18.95 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 125 | 18.95 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 130 | 18.95 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 134 | 18.96 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 19 |
| 135 | 18.97 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 137 | 18.99 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 141 | 19.00 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 143 | 19.00 | radiation | 1.0 | 43200 | < th | dose dependent | sin | 12 | NA |
| 147 | 19.01 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 156 | 19.02 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 158 | 19.03 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 169 | 19.03 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 172 | 19.04 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 179 | 19.04 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 20 | 20 |
| 186 | 19.05 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 191 | 19.05 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 199 | 19.06 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 202 | 19.07 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 207 | 19.07 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 5 |
| 220 | 19.08 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 257 | 19.10 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 274 | 19.11 | radiation | 1.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 328 | 19.13 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 18 |
| 333 | 19.14 | radiation | 1.0 | 14400 | < th | dose independent | sin | 3 | NA |
| 334 | 19.14 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 343 | 19.14 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 6 |
| 350 | 19.15 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 352 | 19.15 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 389 | 19.17 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 391 | 19.17 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 427 | 19.18 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 22 |
| 435 | 19.19 | radiation | 1.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 438 | 19.19 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 10 |
| 468 | 19.20 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 471 | 19.20 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 3 | 4 |
| 476 | 19.21 | radiation | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 595 | 19.22 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 612 | 19.24 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 10 |
| 689 | 19.26 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 19 |
| 696 | 19.27 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 14 | 18 |
| 706 | 19.27 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 7 |
| 709 | 19.27 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 15 |
| 738 | 19.28 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 23 |
| 739 | 19.29 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 809 | 19.31 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 19 |
| 815 | 19.31 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 23 |
| 817 | 19.31 | radiation | 1.0 | 14400 | < th | dose dependent | sin | 4 | NA |
| 851 | 19.32 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 913 | 19.33 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 14 |
| 924 | 19.33 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 19 |
| 931 | 19.33 | radiation | 1.0 | 43200 | < th | dose dependent | no | NA | NA |