Os01g0222500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit).
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Os01g0222500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 188.66 | 0.645 | 7.41 | -1.65 | 0.398 | -3.38 | -2.63 | -0.116 | 0.277 | 6.66 | 101.1 | 23 | 20.1 | -- |
| 188.41 | 0.644 | 7.41 | -1.66 | 0.454 | -3.51 | -2.65 | -- | 0.277 | 6.79 | 102.1 | 23 | 19.9 | -- |
| 203.66 | 0.665 | 7.4 | -1.73 | 0.53 | -3.32 | -- | -0.856 | 0.266 | 7.08 | 106.2 | 39 | 20.3 | -- |
| 205.13 | 0.667 | 7.41 | -1.7 | 0.442 | -3.32 | -- | -- | 0.269 | 6.7 | 103.6 | 48 | 20.3 | -- |
| 206.42 | 0.669 | 7.43 | -1.72 | -- | -3.24 | -- | -0.763 | 0.232 | -- | 99.54 | 48 | 19.7 | -- |
| 278.41 | 0.782 | 7.44 | -1.71 | 1.92 | -- | 0.653 | -- | 0.276 | 0.574 | -- | -- | -- | -- |
| 280.14 | 0.784 | 7.45 | -1.73 | 1.92 | -- | -- | -- | 0.271 | 0.655 | -- | -- | -- | -- |
| 206.87 | 0.67 | 7.42 | -1.68 | -- | -3.26 | -- | -- | 0.264 | -- | 99.22 | 48 | 19.6 | -- |
| 280.95 | 0.781 | 7.38 | -- | 0.179 | -3.2 | -- | -- | 0.465 | 4.99 | 99.5 | 46 | 20 | -- |
| 511.53 | 1.06 | 7.41 | -1.66 | -- | -- | -- | -- | 0.305 | -- | -- | -- | -- | -- |
| 359.25 | 0.887 | 7.4 | -- | 1.9 | -- | -- | -- | 0.464 | 0.611 | -- | -- | -- | -- |
| 281.11 | 0.781 | 7.38 | -- | -- | -3.25 | -- | -- | 0.449 | -- | 99.1 | 46 | 19.5 | -- |
| 584.57 | 1.13 | 7.37 | -- | -- | -- | -- | -- | 0.49 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 197.44 | humidity | 90 | 30 | < th | dose dependent | sin | 2 | NA |
| 2 | 197.80 | humidity | 50 | 30 | > th | dose dependent | sin | 3 | NA |
| 30 | 204.94 | humidity | 90 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 38 | 205.69 | humidity | 90 | 10 | < th | dose dependent | rect. | 22 | 18 |
| 43 | 206.11 | humidity | 90 | 10 | < th | dose dependent | rect. | 4 | 12 |
| 50 | 206.73 | humidity | 90 | 30 | < th | dose dependent | rect. | 20 | 20 |
| 60 | 207.43 | humidity | 90 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 84 | 208.76 | humidity | 80 | 270 | > th | dose independent | rect. | 1 | 13 |
| 169 | 211.56 | radiation | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 183 | 211.88 | humidity | 60 | 270 | > th | dose dependent | rect. | 1 | 13 |
| 193 | 212.06 | humidity | 50 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 229 | 212.98 | humidity | 60 | 90 | > th | dose dependent | rect. | 3 | 12 |
| 255 | 213.87 | humidity | 70 | 10 | > th | dose independent | rect. | 3 | 11 |
| 279 | 214.50 | humidity | 80 | 270 | > th | dose independent | rect. | 1 | 9 |
| 300 | 214.85 | humidity | 80 | 90 | < th | dose independent | rect. | 7 | 10 |
| 303 | 214.93 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 17 |
| 347 | 215.65 | humidity | 80 | 90 | > th | dose independent | sin | 3 | NA |
| 352 | 215.68 | radiation | 10 | 270 | < th | dose dependent | sin | 3 | NA |
| 376 | 215.95 | humidity | 80 | 270 | > th | dose independent | sin | 5 | NA |
| 394 | 216.27 | humidity | 80 | 90 | < th | dose independent | sin | 2 | NA |
| 398 | 216.33 | humidity | 70 | 10 | > th | dose independent | sin | 4 | NA |
| 417 | 216.76 | humidity | 80 | 270 | < th | dose independent | rect. | 7 | 7 |
| 420 | 216.78 | humidity | 60 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 437 | 217.10 | radiation | 30 | 90 | < th | dose dependent | rect. | 15 | 19 |
| 475 | 217.50 | radiation | 20 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 477 | 217.53 | humidity | 70 | 10 | > th | dose independent | rect. | 3 | 9 |
| 518 | 218.14 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 523 | 218.19 | humidity | 70 | 30 | > th | dose independent | rect. | 3 | 17 |
| 532 | 218.29 | radiation | 20 | 90 | < th | dose dependent | no | NA | NA |
| 536 | 218.37 | radiation | 10 | 90 | > th | dose independent | sin | 0 | NA |
| 542 | 218.42 | radiation | 40 | 270 | < th | dose dependent | rect. | 1 | 9 |
| 559 | 218.60 | humidity | 60 | 90 | > th | dose dependent | rect. | 1 | 19 |
| 622 | 219.35 | humidity | 50 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 669 | 219.78 | temperature | 20 | 720 | > th | dose independent | sin | 2 | NA |
| 678 | 219.88 | radiation | 30 | 270 | < th | dose independent | rect. | 24 | 9 |
| 688 | 219.96 | radiation | 20 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 765 | 220.60 | radiation | 20 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 778 | 220.71 | radiation | 1 | 270 | > th | dose independent | rect. | 7 | 8 |
| 782 | 220.75 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 793 | 220.81 | humidity | 50 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 852 | 221.28 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 8 |
| 861 | 221.35 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 10 |
| 919 | 221.74 | radiation | 10 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 929 | 221.84 | humidity | 70 | 10 | > th | dose independent | rect. | 1 | 13 |
| 935 | 221.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 5 |
| 937 | 221.93 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 6 |
| 949 | 222.01 | radiation | 10 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 950 | 222.02 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 8 |
| 982 | 222.22 | radiation | 10 | 270 | < th | dose dependent | rect. | 3 | 11 |