Os01g0217500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DJ-1 family protein.
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Os01g0217500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DJ-1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 248.59 | 0.741 | 9.1 | -1.92 | 2.14 | 1.91 | -0.107 | -7.8 | 0.884 | 2.98 | 3.514 | 1903 | -- | -- |
| 282.11 | 0.782 | 8.96 | -0.717 | 2.09 | 2.15 | -0.37 | -- | 1.02 | 2.88 | 5.507 | 9159 | -- | -- |
| 248.31 | 0.734 | 9.1 | -1.94 | 2.11 | 1.89 | -- | -7.66 | 0.879 | 3.04 | 4.762 | 2025 | -- | -- |
| 281.75 | 0.782 | 8.94 | -0.73 | 2.06 | 2.18 | -- | -- | 1.04 | 2.84 | 5.742 | 9251 | -- | -- |
| 452.03 | 0.99 | 9.08 | -1.76 | -- | 2.75 | -- | -7.27 | 0.885 | -- | -17.97 | 1104 | -- | -- |
| 357.25 | 0.886 | 8.79 | 0.453 | 2.11 | -- | -0.0992 | -- | 1.7 | 2.74 | -- | -- | -- | -- |
| 357.29 | 0.885 | 8.79 | 0.456 | 2.11 | -- | -- | -- | 1.7 | 2.75 | -- | -- | -- | -- |
| 497.35 | 1.04 | 8.89 | -0.296 | -- | 2.65 | -- | -- | 1.27 | -- | 14.4 | 1147 | -- | -- |
| 291.13 | 0.795 | 8.89 | -- | 2.07 | 1.76 | -- | -- | 1.23 | 2.81 | 10.8 | 9133 | -- | -- |
| 617.08 | 1.16 | 8.78 | 0.546 | -- | -- | -- | -- | 1.75 | -- | -- | -- | -- | -- |
| 362.76 | 0.891 | 8.8 | -- | 2.12 | -- | -- | -- | 1.65 | 2.75 | -- | -- | -- | -- |
| 498.23 | 1.04 | 8.88 | -- | -- | 2.58 | -- | -- | 1.32 | -- | 14.4 | 1112 | -- | -- |
| 624.94 | 1.17 | 8.79 | -- | -- | -- | -- | -- | 1.69 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 236.34 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 14 |
| 28 | 238.24 | radiation | 20 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 31 | 238.46 | humidity | 90 | 14400 | > th | dose dependent | sin | 5 | NA |
| 38 | 238.79 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 41 | 238.93 | humidity | 90 | 14400 | > th | dose dependent | rect. | 11 | 19 |
| 48 | 239.34 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 118 | 241.76 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 136 | 242.22 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 190 | 242.99 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 219 | 243.31 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 262 | 244.18 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 265 | 244.42 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 271 | 244.71 | wind | 3 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 281 | 245.48 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 286 | 245.68 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 5 |
| 291 | 245.97 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 292 | 245.98 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 298 | 246.08 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 317 | 246.50 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 343 | 247.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 376 | 247.79 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 385 | 247.91 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 16 |
| 398 | 248.05 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 409 | 248.11 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 477 | 248.65 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 483 | 248.74 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 485 | 248.75 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 490 | 248.79 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 4 |
| 521 | 248.92 | temperature | 30 | 4320 | < th | dose dependent | rect. | 5 | 4 |
| 523 | 248.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 526 | 248.97 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 538 | 249.04 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 539 | 249.04 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 561 | 249.26 | wind | 3 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 582 | 249.41 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 683 | 250.01 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 13 |
| 694 | 250.07 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 748 | 250.28 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 769 | 250.37 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 790 | 250.45 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 6 |
| 792 | 250.46 | temperature | 20 | 4320 | > th | dose dependent | sin | 0 | NA |
| 795 | 250.46 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 15 |
| 810 | 250.52 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 834 | 250.58 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 856 | 250.65 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 16 |
| 896 | 250.80 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 913 | 250.86 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 960 | 251.02 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 22 |
| 991 | 251.10 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |