Os01g0210800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 4 protein.
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Os01g0210800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 4 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.65 | 0.347 | 8.43 | -2.16 | 0.252 | -0.543 | 0.935 | 2.71 | -0.141 | 2.72 | 1.3 | 1410 | -- | -- |
| 62.41 | 0.368 | 8.41 | -1.84 | 0.299 | -0.769 | 0.68 | -- | -0.14 | 2.67 | 1.089 | 1438 | -- | -- |
| 56.34 | 0.35 | 8.42 | -2.19 | 0.325 | -0.607 | -- | 2.82 | -0.133 | 1.88 | 1.298 | 1462 | -- | -- |
| 62.54 | 0.368 | 8.41 | -1.84 | 0.294 | -0.91 | -- | -- | -0.145 | 1.65 | 0.228 | 1448 | -- | -- |
| 61.53 | 0.365 | 8.42 | -2.15 | -- | -0.543 | -- | 2.76 | -0.134 | -- | 1.3 | 1412 | -- | -- |
| 70.09 | 0.392 | 8.37 | -1.66 | 0.27 | -- | 0.855 | -- | 0.0304 | 2.59 | -- | -- | -- | -- |
| 72.51 | 0.399 | 8.37 | -1.68 | 0.273 | -- | -- | -- | 0.026 | 1.81 | -- | -- | -- | -- |
| 64.62 | 0.374 | 8.42 | -1.94 | -- | -0.975 | -- | -- | -0.135 | -- | 0.19 | 1381 | -- | -- |
| 136.43 | 0.544 | 8.33 | -- | 0.23 | -0.801 | -- | -- | 0.122 | 1.79 | 7.956 | 2951 | -- | -- |
| 77.03 | 0.41 | 8.37 | -1.67 | -- | -- | -- | -- | 0.0322 | -- | -- | -- | -- | -- |
| 146.72 | 0.567 | 8.33 | -- | 0.243 | -- | -- | -- | 0.213 | 1.62 | -- | -- | -- | -- |
| 138.91 | 0.549 | 8.34 | -- | -- | -0.709 | -- | -- | 0.125 | -- | 7.8 | 2763 | -- | -- |
| 150.31 | 0.572 | 8.32 | -- | -- | -- | -- | -- | 0.217 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.25 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 5 |
| 13 | 49.33 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 19 | 49.92 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 20 | 49.92 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 24 | 49.99 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 67 | 51.20 | humidity | 50 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 78 | 51.35 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 82 | 51.39 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 115 | 51.76 | humidity | 80 | 1440 | < th | dose independent | sin | 4 | NA |
| 116 | 51.76 | humidity | 80 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 119 | 51.77 | humidity | 60 | 1440 | > th | dose dependent | sin | 3 | NA |
| 136 | 51.85 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 16 |
| 156 | 51.99 | humidity | 50 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 173 | 52.00 | humidity | 90 | 1440 | < th | dose dependent | rect. | 7 | 7 |
| 179 | 52.03 | humidity | 50 | 14400 | < th | dose dependent | rect. | 12 | 2 |
| 242 | 52.25 | humidity | 90 | 1440 | < th | dose dependent | sin | 3 | NA |
| 258 | 52.32 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 260 | 52.32 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 276 | 52.36 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 12 |
| 315 | 52.49 | humidity | 50 | 14400 | < th | dose dependent | sin | 7 | NA |
| 434 | 52.89 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 9 |
| 464 | 53.01 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 511 | 53.17 | humidity | 50 | 14400 | < th | dose dependent | rect. | 11 | 22 |
| 634 | 53.49 | humidity | 50 | 14400 | < th | dose dependent | no | NA | NA |
| 801 | 53.61 | radiation | 1 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 844 | 53.80 | humidity | 50 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 931 | 54.16 | radiation | 1 | 1440 | < th | dose independent | rect. | 6 | 10 |
| 944 | 54.20 | radiation | 1 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 982 | 54.34 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 993 | 54.37 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 8 |