Os01g0207400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0207400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 245.62 | 0.736 | 11.3 | -3.88 | 2.5 | 1.08 | 3.62 | 0.162 | -0.824 | 4.61 | 73.2 | 1193 | -- | -- |
| 245.68 | 0.73 | 11.3 | -3.9 | 2.5 | 1.08 | 3.64 | -- | -0.828 | 4.6 | 73.27 | 1192 | -- | -- |
| 279.32 | 0.778 | 11.3 | -3.82 | 2.52 | 1.03 | -- | 0.734 | -0.818 | 4.48 | 73.07 | 1212 | -- | -- |
| 280.14 | 0.78 | 11.3 | -3.93 | 2.52 | 1.05 | -- | -- | -0.844 | 4.48 | 72.84 | 1209 | -- | -- |
| 537.02 | 1.09 | 11.3 | -3.57 | -- | -1.23 | -- | -1.46 | -0.646 | -- | 73.07 | 1212 | -- | -- |
| 282.62 | 0.788 | 11.2 | -3.7 | 2.66 | -- | 3.5 | -- | -0.694 | 4.24 | -- | -- | -- | -- |
| 316.5 | 0.833 | 11.3 | -3.73 | 2.68 | -- | -- | -- | -0.713 | 4.16 | -- | -- | -- | -- |
| 542.94 | 1.09 | 11.3 | -3.52 | -- | -1.28 | -- | -- | -0.656 | -- | 72.84 | 1209 | -- | -- |
| 392.6 | 0.923 | 11.2 | -- | 2.59 | 3.64 | -- | -- | -0.333 | 4.16 | 65.22 | 47520 | -- | -- |
| 704.91 | 1.24 | 11.3 | -3.63 | -- | -- | -- | -- | -0.642 | -- | -- | -- | -- | -- |
| 684.04 | 1.22 | 11.2 | -- | 2.61 | -- | -- | -- | -0.297 | 4.19 | -- | -- | -- | -- |
| 768.83 | 1.29 | 11.1 | -- | -- | 3.34 | -- | -- | -0.0824 | -- | 64.42 | 47520 | -- | -- |
| 1051.81 | 1.51 | 11.2 | -- | -- | -- | -- | -- | -0.239 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 231.30 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 15 | 237.08 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 4 |
| 27 | 239.15 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 14 | 18 |
| 28 | 239.18 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 15 | 9 |
| 31 | 239.29 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 58 | 240.87 | humidity | 80.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 64 | 241.29 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 12 |
| 65 | 241.29 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 94 | 242.47 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 5 | 20 |
| 100 | 242.62 | humidity | 90.0 | 720 | < th | dose independent | rect. | 17 | 6 |
| 106 | 242.78 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 8 | 21 |
| 107 | 242.78 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 8 | 21 |
| 138 | 243.73 | wind | 1.0 | 720 | > th | dose independent | rect. | 17 | 3 |
| 155 | 244.23 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 5 | 12 |
| 166 | 244.50 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 183 | 244.84 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 3 |
| 184 | 244.84 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 187 | 244.95 | humidity | 50.0 | 720 | > th | dose dependent | sin | 13 | NA |
| 221 | 245.37 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 5 | 3 |
| 252 | 245.97 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 20 | 21 |
| 271 | 246.29 | humidity | 90.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 297 | 246.59 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 20 |
| 298 | 246.59 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 20 |
| 345 | 247.26 | wind | 9.0 | 720 | < th | dose independent | rect. | 5 | 12 |
| 359 | 247.46 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 5 | 10 |
| 376 | 247.63 | humidity | 90.0 | 270 | > th | dose independent | rect. | 5 | 19 |
| 378 | 247.64 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 402 | 247.86 | wind | 9.0 | 720 | < th | dose independent | rect. | 17 | 12 |
| 416 | 248.13 | humidity | 90.0 | 720 | > th | dose independent | rect. | 10 | 14 |
| 423 | 248.20 | wind | 5.0 | 720 | < th | dose independent | rect. | 5 | 3 |
| 431 | 248.27 | temperature | 10.0 | 720 | > th | dose independent | rect. | 5 | 12 |
| 432 | 248.27 | temperature | 10.0 | 720 | > th | dose independent | rect. | 17 | 12 |
| 433 | 248.27 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 5 | 12 |
| 434 | 248.27 | radiation | 30.0 | 720 | < th | dose independent | rect. | 17 | 12 |
| 469 | 248.66 | humidity | 90.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 485 | 248.83 | wind | 9.0 | 720 | < th | dose independent | rect. | 20 | 21 |
| 487 | 248.88 | wind | 9.0 | 720 | < th | dose dependent | rect. | 5 | 3 |
| 495 | 248.95 | humidity | 90.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 496 | 248.95 | wind | 7.0 | 720 | < th | dose independent | rect. | 5 | 10 |
| 502 | 249.02 | radiation | 30.0 | 720 | < th | dose independent | rect. | 5 | 3 |
| 515 | 249.12 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 20 | 21 |
| 520 | 249.20 | wind | 9.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 532 | 249.39 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 18 |
| 534 | 249.40 | temperature | 10.0 | 720 | > th | dose independent | rect. | 17 | 3 |
| 535 | 249.40 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 536 | 249.40 | radiation | 30.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 538 | 249.40 | temperature | 10.0 | 720 | > th | dose independent | rect. | 20 | 21 |
| 557 | 249.56 | temperature | 10.0 | 720 | > th | dose independent | rect. | 5 | 3 |
| 558 | 249.56 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 3 |
| 559 | 249.56 | humidity | 50.0 | 720 | > th | dose independent | rect. | 5 | 3 |
| 561 | 249.56 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 5 | 3 |
| 562 | 249.56 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 5 | 3 |
| 563 | 249.56 | temperature | 10.0 | 720 | > th | dose independent | rect. | 8 | 21 |
| 576 | 249.66 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 13 | 4 |
| 587 | 249.74 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 5 | 3 |
| 588 | 249.74 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 5 | 3 |
| 625 | 250.14 | humidity | 90.0 | 720 | < th | dose independent | rect. | 8 | 16 |
| 728 | 250.82 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 773 | 251.13 | wind | 1.0 | 720 | > th | dose independent | rect. | 8 | 12 |
| 778 | 251.14 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 1 | 4 |
| 790 | 251.19 | wind | 9.0 | 720 | < th | dose independent | rect. | 3 | 14 |
| 833 | 251.49 | wind | 1.0 | 720 | > th | dose independent | rect. | 10 | 10 |
| 846 | 251.54 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 5 | 3 |
| 895 | 251.86 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 14 |
| 901 | 251.93 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 1 | 4 |
| 902 | 251.93 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 1 | 4 |
| 912 | 252.00 | temperature | 20.0 | 720 | > th | dose independent | rect. | 13 | 4 |
| 933 | 252.12 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 13 | 20 |
| 945 | 252.17 | wind | 7.0 | 720 | < th | dose independent | rect. | 1 | 4 |
| 954 | 252.20 | humidity | 70.0 | 720 | < th | dose independent | rect. | 16 | 17 |
| 958 | 252.22 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 1 | 4 |
| 961 | 252.23 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 973 | 252.29 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 12 |
| 992 | 252.37 | wind | 9.0 | 720 | < th | dose independent | rect. | 13 | 4 |
| 994 | 252.38 | temperature | 15.0 | 720 | > th | dose independent | rect. | 3 | 14 |