Os01g0205600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Enoyl-CoA hydratase/isomerase domain containing protein.
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Os01g0205600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Enoyl-CoA hydratase/isomerase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.07 | 0.235 | 11.3 | 0.74 | 0.148 | -0.738 | -0.264 | 0.58 | 0.12 | 2.17 | 26.6 | 309 | -- | -- |
| 25.15 | 0.234 | 11.3 | 0.708 | 0.143 | -0.694 | -0.292 | -- | 0.113 | 2.03 | 26.6 | 296 | -- | -- |
| 25.27 | 0.234 | 11.3 | 0.768 | 0.151 | -0.74 | -- | 0.851 | 0.129 | 2.88 | 26.61 | 294 | -- | -- |
| 25.4 | 0.235 | 11.3 | 0.684 | 0.172 | -0.645 | -- | -- | 0.108 | 3.07 | 26.64 | 294 | -- | -- |
| 26.11 | 0.238 | 11.3 | 0.834 | -- | -0.879 | -- | 1.2 | 0.148 | -- | 26.29 | 259 | -- | -- |
| 32.52 | 0.267 | 11.3 | 0.592 | 0.411 | -- | 0.123 | -- | 0.0973 | 4.39 | -- | -- | -- | -- |
| 32.56 | 0.267 | 11.3 | 0.591 | 0.411 | -- | -- | -- | 0.0967 | 4.31 | -- | -- | -- | -- |
| 26.43 | 0.239 | 11.3 | 0.711 | -- | -0.774 | -- | -- | 0.123 | -- | 26.2 | 256 | -- | -- |
| 37.21 | 0.284 | 11.3 | -- | 0.253 | -0.507 | -- | -- | 0.0177 | 3.46 | 27.6 | 335 | -- | -- |
| 41.65 | 0.302 | 11.3 | 0.607 | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
| 41.75 | 0.302 | 11.3 | -- | 0.422 | -- | -- | -- | 0.0309 | 4.29 | -- | -- | -- | -- |
| 39.48 | 0.293 | 11.3 | -- | -- | -0.683 | -- | -- | 0.0399 | -- | 26.4 | 256 | -- | -- |
| 51.36 | 0.335 | 11.3 | -- | -- | -- | -- | -- | 0.0402 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.00 | temperature | 30 | 270 | < th | dose independent | rect. | 9 | 13 |
| 3 | 25.03 | temperature | 30 | 270 | < th | dose independent | rect. | 16 | 23 |
| 7 | 25.22 | temperature | 25 | 270 | > th | dose dependent | rect. | 7 | 12 |
| 33 | 25.46 | temperature | 30 | 270 | < th | dose independent | sin | 21 | NA |
| 39 | 25.48 | temperature | 25 | 270 | > th | dose dependent | sin | 22 | NA |
| 44 | 25.51 | temperature | 30 | 270 | < th | dose independent | rect. | 8 | 23 |
| 50 | 25.52 | temperature | 25 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 56 | 25.57 | temperature | 25 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 67 | 25.62 | temperature | 30 | 270 | < th | dose independent | no | NA | NA |
| 68 | 25.62 | temperature | 30 | 270 | > th | dose independent | rect. | 13 | 23 |
| 69 | 25.62 | temperature | 25 | 720 | > th | dose dependent | rect. | 7 | 4 |
| 70 | 25.63 | temperature | 30 | 270 | > th | dose independent | rect. | 8 | 10 |
| 87 | 25.65 | temperature | 30 | 720 | < th | dose independent | rect. | 19 | 17 |
| 93 | 25.67 | temperature | 30 | 270 | > th | dose independent | no | NA | NA |
| 202 | 25.72 | temperature | 30 | 270 | > th | dose independent | sin | 22 | NA |
| 225 | 25.76 | temperature | 30 | 270 | > th | dose independent | rect. | 16 | 23 |
| 226 | 25.76 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 23 |
| 287 | 25.91 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 9 |
| 290 | 25.92 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 337 | 26.00 | temperature | 30 | 270 | < th | dose independent | rect. | 4 | 23 |
| 442 | 26.24 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 5 |
| 448 | 26.27 | temperature | 25 | 720 | > th | dose dependent | sin | 5 | NA |
| 452 | 26.28 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 14 |
| 455 | 26.30 | temperature | 30 | 720 | < th | dose independent | sin | 7 | NA |
| 505 | 26.43 | temperature | 30 | 720 | > th | dose independent | rect. | 9 | 2 |
| 536 | 26.49 | temperature | 30 | 720 | > th | dose independent | rect. | 9 | 4 |
| 556 | 26.50 | temperature | 30 | 270 | < th | dose independent | rect. | 22 | 23 |
| 557 | 26.51 | temperature | 30 | 720 | > th | dose independent | sin | 7 | NA |
| 754 | 26.77 | temperature | 30 | 720 | > th | dose dependent | sin | 8 | NA |
| 830 | 26.81 | radiation | 1 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 836 | 26.82 | radiation | 40 | 720 | > th | dose dependent | sin | 12 | NA |