BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0205600 Os01g0205600|AK067719
         (247 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14430.1  | chr4:8304910-8305632 REVERSE LENGTH=241            120   5e-28
AT4G14440.1  | chr4:8306946-8307662 REVERSE LENGTH=239            115   2e-26
AT1G65520.1  | chr1:24361171-24361893 REVERSE LENGTH=241           98   5e-21

>AT4G14430.1 | chr4:8304910-8305632 REVERSE LENGTH=241
          Length = 240

 Score =  120 bits (302), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 103/226 (45%), Gaps = 7/226 (3%)

Query: 6   LCTVEKRGAVHVITLTGAGEHRLGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKYFS 65
           +CT+EKRG + ++TLTG GEHR  P                              GK+FS
Sbjct: 1   MCTLEKRGDLFLLTLTGDGEHRFHPDTIATILSLLEQAKSQSTRGSILITTA--NGKFFS 58

Query: 66  NGFDLDWARTVPAELHAS-----MGGAFRGLVADLLALPVPXXXXXXXXXXXXXXXXXXX 120
           NGFDL WA+T  ++  A+     M  +F+ +VA LL LP+P                   
Sbjct: 59  NGFDLAWAQTAGSKTGAANRLHQMVESFKPVVAALLDLPMPTIAALNGHAAAAGLILALS 118

Query: 121 XXXVVMRASRGFLYMSEVDAGLKIVDFFAELIRQKVPDAVNRRDLVLRGDKMTAADALRR 180
              V MR  RG LYMSEVD GL + D+F+ L+R K+  +  RR+L+L G K+   +A+  
Sbjct: 119 HDYVFMRKDRGVLYMSEVDIGLSMPDYFSALVRAKIGTSAARRELLLSGKKIRGEEAVGL 178

Query: 181 GIXXXXXXXXXXXXXXXXXXXXXXXXXXGWDGEIVAETRKAIWPEL 226
           GI                           W GE+ A  RK+++PEL
Sbjct: 179 GIVDSAAYDSEEGVVVASVRLGEKLAAKKWSGEVYASIRKSLYPEL 224



>AT4G14440.1 | chr4:8306946-8307662 REVERSE LENGTH=239
          Length = 238

 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 100/225 (44%), Gaps = 7/225 (3%)

Query: 6   LCTVEKRGAVHVITLTGAGEHRLGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKYFS 65
           +CT+EKRG + ++TLTG  EHR  P                              GK+FS
Sbjct: 1   MCTLEKRGDLFLLTLTGEDEHRFHPDTIASVLSLLEQAKSQSTKGSVLITTG--HGKFFS 58

Query: 66  NGFDLDWARTVP----AELHASMGGAFRGLVADLLALPVPXXXXXXXXXXXXXXXXXXXX 121
           NGFDL WA++        +H  M  +F+ ++A LL LP+P                    
Sbjct: 59  NGFDLAWAQSAGHGAIKRMH-QMVKSFKPVLAALLDLPMPTIAALNGHAAASGLMFALSH 117

Query: 122 XXVVMRASRGFLYMSEVDAGLKIVDFFAELIRQKVPDAVNRRDLVLRGDKMTAADALRRG 181
             V MR  RG LYMSEVD GL + D+F+ L+  KV   + RR+L+L G K+   +A+  G
Sbjct: 118 DYVFMRKDRGVLYMSEVDIGLPVPDYFSALVVAKVGSGIARRELLLSGKKLKGEEAVALG 177

Query: 182 IXXXXXXXXXXXXXXXXXXXXXXXXXXGWDGEIVAETRKAIWPEL 226
           I                           W+GE+ A  RK+++PEL
Sbjct: 178 IVDSAAHDSAEGVVEATVSLGESLAAKKWNGEVYATIRKSLYPEL 222



>AT1G65520.1 | chr1:24361171-24361893 REVERSE LENGTH=241
          Length = 240

 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 85/177 (48%), Gaps = 2/177 (1%)

Query: 6   LCTVEKRGAVHVITLTGAGEHRLGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKYFS 65
           +C++EKR  + ++ LTG GEHRL P                             +GK+FS
Sbjct: 1   MCSLEKRDRLFILKLTGDGEHRLNP-TLLDSLRSTINQIRSDPSFSQSVLITTSDGKFFS 59

Query: 66  NGFDLDWARTVPAELHASMGGAFRGLVADLLALPVPXXXXXXXXXXXXXXXXXXXXXXVV 125
           NG+DL  A + P+ L   M    R LVADL++LP+P                      V+
Sbjct: 60  NGYDLALAESNPS-LSVVMDAKLRSLVADLISLPMPTIAAVTGHASAAGCILAMSHDYVL 118

Query: 126 MRASRGFLYMSEVDAGLKIVDFFAELIRQKVPDAVNRRDLVLRGDKMTAADALRRGI 182
           MR  RGFLYMSE+D  L +  +F  +IR K+     RRD++L   K+TA   ++ GI
Sbjct: 119 MRRDRGFLYMSELDIELIVPAWFMAVIRGKIGSPAARRDVMLTAAKVTADVGVKMGI 175



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.138    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,262,088
Number of extensions: 75056
Number of successful extensions: 161
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 154
Number of HSP's successfully gapped: 3
Length of query: 247
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 151
Effective length of database: 8,474,633
Effective search space: 1279669583
Effective search space used: 1279669583
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)