Os01g0203000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BZR1, transcriptional repressor family protein.
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Os01g0203000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BZR1, transcriptional repressor family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.21 | 0.362 | 11.1 | 0.804 | 0.771 | -0.616 | -1.27 | -4.05 | 0.461 | 3.73 | 14.29 | 209 | -- | -- |
| 64.45 | 0.374 | 11 | 1.38 | 0.679 | -0.687 | -0.386 | -- | 0.624 | 3.92 | 23.89 | 203 | -- | -- |
| 62.77 | 0.369 | 11.1 | 0.937 | 0.816 | -0.525 | -- | -2.97 | 0.496 | 3.63 | 12 | 330 | -- | -- |
| 64.86 | 0.375 | 11 | 1.4 | 0.688 | -0.681 | -- | -- | 0.617 | 3.68 | 23.8 | 206 | -- | -- |
| 83.18 | 0.425 | 11.1 | 1.25 | -- | -0.97 | -- | -1.68 | 0.545 | -- | 24.24 | 196 | -- | -- |
| 72.58 | 0.399 | 11 | 1.27 | 0.985 | -- | -0.177 | -- | 0.533 | 3.92 | -- | -- | -- | -- |
| 72.67 | 0.399 | 11 | 1.28 | 0.984 | -- | -- | -- | 0.534 | 3.93 | -- | -- | -- | -- |
| 80.91 | 0.419 | 11 | 1.52 | -- | -1.29 | -- | -- | 0.685 | -- | 24.22 | 165 | -- | -- |
| 113.06 | 0.495 | 11.1 | -- | 0.879 | -0.422 | -- | -- | 0.385 | 3.93 | 27.23 | 113 | -- | -- |
| 125.7 | 0.524 | 11.1 | 1.32 | -- | -- | -- | -- | 0.56 | -- | -- | -- | -- | -- |
| 115.55 | 0.503 | 11.1 | -- | 1.01 | -- | -- | -- | 0.392 | 3.91 | -- | -- | -- | -- |
| 140.08 | 0.551 | 11.1 | -- | -- | -1.07 | -- | -- | 0.477 | -- | 24.74 | 161 | -- | -- |
| 171.37 | 0.611 | 11.1 | -- | -- | -- | -- | -- | 0.414 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.57 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 2 | 58.66 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 12 | 58.90 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 8 | 21 |
| 19 | 59.04 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 24 | 59.16 | wind | 7.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 25 | 59.16 | wind | 7.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 37 | 59.41 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 43 | 59.51 | temperature | 10.0 | 270 | > th | dose dependent | no | NA | NA |
| 44 | 59.51 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 49 | 59.58 | wind | 7.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 55 | 59.64 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 56 | 59.65 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 65 | 59.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 71 | 59.80 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 86 | 59.91 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 92 | 59.96 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 101 | 60.02 | wind | 7.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 104 | 60.04 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 110 | 60.06 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 114 | 60.13 | wind | 7.0 | 14400 | > th | dose independent | rect. | 20 | 14 |
| 118 | 60.16 | wind | 7.0 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 122 | 60.17 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 134 | 60.23 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 9 | 16 |
| 135 | 60.24 | temperature | 30.0 | 270 | < th | dose dependent | no | NA | NA |
| 145 | 60.28 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 165 | 60.42 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 172 | 60.44 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 189 | 60.52 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 20 | 8 |
| 202 | 60.55 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 8 |
| 214 | 60.60 | wind | 7.0 | 14400 | > th | dose independent | rect. | 20 | 8 |
| 219 | 60.61 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 18 | 17 |
| 240 | 60.69 | wind | 7.0 | 14400 | < th | dose independent | rect. | 20 | 8 |
| 263 | 60.81 | wind | 9.0 | 43200 | > th | dose dependent | sin | 12 | NA |
| 274 | 60.84 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 317 | 60.98 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 329 | 61.04 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 361 | 61.14 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 4 |
| 362 | 61.14 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 18 |
| 374 | 61.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 395 | 61.25 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 404 | 61.27 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 435 | 61.33 | wind | 9.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 449 | 61.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 450 | 61.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 465 | 61.39 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 20 |
| 520 | 61.54 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 524 | 61.54 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 569 | 61.63 | wind | 9.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 623 | 61.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 627 | 61.73 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 628 | 61.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 676 | 61.79 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 682 | 61.80 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 745 | 61.88 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 754 | 61.89 | wind | 5.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 778 | 61.92 | temperature | 30.0 | 90 | < th | dose dependent | sin | 22 | NA |
| 798 | 61.94 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 11 |
| 801 | 61.95 | temperature | 10.0 | 30 | > th | dose dependent | sin | 20 | NA |
| 838 | 61.99 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 22 | 21 |
| 893 | 62.07 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 983 | 62.20 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 984 | 62.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 986 | 62.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 1 |