Os01g0196600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 260 kDa major acidic fibroblast growth factor-stimulated phosphoprotein (Fragment).
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Os01g0196600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 260 kDa major acidic fibroblast growth factor-stimulated phosphoprotein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.07 | 0.361 | 7.79 | 0.0746 | 0.278 | -0.8 | -0.265 | -0.174 | -0.282 | 5.47 | 42.72 | 46 | -- | -- |
| 59.14 | 0.358 | 7.8 | 0.0759 | 0.283 | -0.834 | -0.383 | -- | -0.284 | 4.96 | 42.81 | 46 | -- | -- |
| 59.15 | 0.358 | 7.79 | 0.0763 | 0.274 | -0.748 | -- | -0.205 | -0.277 | 6.39 | 43.83 | 46 | -- | -- |
| 59.29 | 0.359 | 7.79 | 0.0823 | 0.273 | -0.746 | -- | -- | -0.277 | 6.41 | 43.83 | 46 | -- | -- |
| 63.03 | 0.37 | 7.8 | 0.085 | -- | -0.75 | -- | -0.191 | -0.271 | -- | 43.82 | 44 | -- | -- |
| 66.62 | 0.383 | 7.78 | 0.0816 | 0.589 | -- | 0.471 | -- | -0.242 | 10.6 | -- | -- | -- | -- |
| 67.53 | 0.385 | 7.78 | 0.1 | 0.587 | -- | -- | -- | -0.241 | 10.5 | -- | -- | -- | -- |
| 63.14 | 0.37 | 7.8 | 0.0901 | -- | -0.749 | -- | -- | -0.272 | -- | 43.75 | 43 | -- | -- |
| 59.47 | 0.359 | 7.79 | -- | 0.275 | -0.747 | -- | -- | -0.286 | 6.34 | 43.46 | 46 | -- | -- |
| 88.72 | 0.44 | 7.79 | 0.0897 | -- | -- | -- | -- | -0.244 | -- | -- | -- | -- | -- |
| 67.8 | 0.385 | 7.78 | -- | 0.587 | -- | -- | -- | -0.252 | 10.5 | -- | -- | -- | -- |
| 63.35 | 0.371 | 7.8 | -- | -- | -0.746 | -- | -- | -0.282 | -- | 43.45 | 43 | -- | -- |
| 88.93 | 0.44 | 7.79 | -- | -- | -- | -- | -- | -0.254 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.84 | radiation | 40 | 90 | < th | dose dependent | rect. | 7 | 12 |
| 3 | 58.17 | radiation | 20 | 90 | < th | dose dependent | rect. | 7 | 8 |
| 4 | 58.23 | radiation | 10 | 10 | < th | dose independent | rect. | 7 | 22 |
| 5 | 58.31 | radiation | 30 | 90 | < th | dose independent | rect. | 9 | 12 |
| 6 | 58.37 | radiation | 30 | 90 | < th | dose independent | rect. | 7 | 14 |
| 7 | 58.38 | radiation | 20 | 90 | < th | dose dependent | rect. | 7 | 6 |
| 8 | 58.41 | radiation | 30 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 9 | 58.48 | radiation | 30 | 10 | < th | dose dependent | rect. | 7 | 22 |
| 11 | 58.51 | radiation | 20 | 90 | < th | dose independent | rect. | 7 | 21 |
| 13 | 58.58 | radiation | 30 | 90 | < th | dose independent | rect. | 7 | 12 |
| 14 | 58.58 | radiation | 40 | 90 | < th | dose dependent | rect. | 7 | 14 |
| 16 | 58.59 | radiation | 30 | 90 | < th | dose dependent | rect. | 6 | 23 |
| 56 | 59.05 | radiation | 40 | 90 | < th | dose dependent | sin | 0 | NA |
| 69 | 59.18 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 79 | 59.22 | radiation | 40 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 84 | 59.26 | radiation | 30 | 90 | < th | dose independent | rect. | 23 | 23 |
| 96 | 59.32 | radiation | 40 | 30 | < th | dose dependent | no | NA | NA |
| 98 | 59.33 | radiation | 40 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 101 | 59.36 | radiation | 30 | 90 | < th | dose independent | sin | 23 | NA |
| 113 | 59.39 | radiation | 40 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 117 | 59.41 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 126 | 59.44 | radiation | 1 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 136 | 59.47 | radiation | 40 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 149 | 59.53 | radiation | 10 | 270 | < th | dose independent | rect. | 6 | 8 |
| 162 | 59.57 | radiation | 1 | 30 | > th | dose dependent | rect. | 5 | 11 |
| 224 | 59.71 | radiation | 30 | 720 | < th | dose independent | rect. | 7 | 4 |
| 229 | 59.73 | radiation | 1 | 90 | > th | dose dependent | no | NA | NA |
| 381 | 59.79 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 411 | 59.82 | radiation | 1 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 412 | 59.82 | radiation | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 425 | 59.85 | radiation | 30 | 720 | < th | dose independent | rect. | 23 | 12 |
| 431 | 59.86 | radiation | 30 | 10 | < th | dose dependent | rect. | 9 | 20 |
| 457 | 59.90 | radiation | 30 | 90 | < th | dose independent | rect. | 15 | 23 |
| 498 | 59.97 | humidity | 60 | 90 | > th | dose dependent | rect. | 7 | 12 |
| 500 | 59.97 | radiation | 40 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 510 | 59.99 | humidity | 60 | 10 | > th | dose dependent | rect. | 7 | 14 |
| 551 | 60.06 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 18 |
| 554 | 60.06 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 557 | 60.07 | radiation | 10 | 270 | < th | dose independent | rect. | 9 | 1 |
| 573 | 60.08 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 11 |
| 605 | 60.12 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 620 | 60.14 | radiation | 1 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 812 | 60.22 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 817 | 60.22 | radiation | 1 | 30 | > th | dose dependent | rect. | 8 | 23 |
| 839 | 60.24 | radiation | 30 | 90 | < th | dose independent | no | NA | NA |
| 852 | 60.26 | radiation | 40 | 270 | < th | dose dependent | rect. | 23 | 13 |
| 856 | 60.27 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 885 | 60.29 | radiation | 40 | 720 | < th | dose dependent | rect. | 7 | 3 |
| 919 | 60.32 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 934 | 60.32 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 965 | 60.33 | radiation | 1 | 90 | > th | dose dependent | sin | 0 | NA |