Os01g0190000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Taurine catabolism dioxygenase TauD/TfdA family protein.
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Os01g0190000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Taurine catabolism dioxygenase TauD/TfdA family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.72 | 0.422 | 13.2 | 0.974 | 1.63 | 1.48 | -0.0343 | 2.11 | 0.113 | 16.8 | 1 | 1490 | -- | -- |
| 84.35 | 0.428 | 13.2 | 1.17 | 1.68 | 1.23 | -0.239 | -- | 0.151 | 16.6 | 1.226 | 1518 | -- | -- |
| 80.52 | 0.418 | 13.2 | 0.96 | 1.68 | 1.56 | -- | 2.33 | 0.121 | 16.6 | 0.9948 | 1513 | -- | -- |
| 84.41 | 0.428 | 13.2 | 1.17 | 1.68 | 1.22 | -- | -- | 0.143 | 16.7 | 1.221 | 1518 | -- | -- |
| 213.31 | 0.68 | 13.1 | 0.897 | -- | 1.55 | -- | 2.47 | 0.0976 | -- | 0.84 | 1439 | -- | -- |
| 100.73 | 0.471 | 13.2 | 0.985 | 1.6 | -- | 0.116 | -- | 0.0152 | 17.2 | -- | -- | -- | -- |
| 100.76 | 0.47 | 13.2 | 0.985 | 1.6 | -- | -- | -- | 0.0158 | 17.2 | -- | -- | -- | -- |
| 214.85 | 0.683 | 13.1 | 1.18 | -- | 1.31 | -- | -- | 0.212 | -- | 1.584 | 1421 | -- | -- |
| 113.86 | 0.497 | 13.1 | -- | 1.71 | 1.15 | -- | -- | 0.297 | 16.9 | 7 | 7700 | -- | -- |
| 234.52 | 0.716 | 13.2 | 0.929 | -- | -- | -- | -- | -0.0246 | -- | -- | -- | -- | -- |
| 126.35 | 0.526 | 13.2 | -- | 1.58 | -- | -- | -- | -0.094 | 17.2 | -- | -- | -- | -- |
| 241.41 | 0.724 | 13.1 | -- | -- | 0.657 | -- | -- | 0.162 | -- | 42.16 | 8520 | -- | -- |
| 257.28 | 0.749 | 13.2 | -- | -- | -- | -- | -- | -0.128 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.06 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 17 |
| 4 | 74.85 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 19 |
| 21 | 77.23 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 43 | 78.20 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 54 | 78.61 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 55 | 78.62 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 75 | 79.20 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 93 | 79.61 | wind | 3.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 95 | 79.69 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 99 | 79.76 | wind | 7.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 103 | 79.80 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 104 | 79.81 | wind | 3.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 117 | 80.00 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 10 |
| 126 | 80.12 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 6 |
| 129 | 80.17 | wind | 7.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 140 | 80.29 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 143 | 80.30 | temperature | 20.0 | 30 | > th | dose independent | rect. | 22 | 6 |
| 146 | 80.32 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 148 | 80.32 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 14 |
| 152 | 80.33 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 184 | 80.38 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 193 | 80.42 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 196 | 80.42 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 225 | 80.46 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 4 |
| 226 | 80.48 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 8 |
| 231 | 80.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 232 | 80.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 238 | 80.60 | temperature | 30.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 239 | 80.60 | temperature | 30.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 240 | 80.60 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 12 |
| 276 | 80.64 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 331 | 80.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 15 |
| 333 | 80.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 385 | 80.85 | temperature | 30.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 397 | 80.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 21 |
| 398 | 80.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 430 | 81.04 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 19 |
| 434 | 81.04 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 19 |
| 461 | 81.10 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 515 | 81.21 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 551 | 81.24 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 574 | 81.30 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 17 |
| 585 | 81.30 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 10 |
| 586 | 81.31 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 661 | 81.32 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 846 | 81.40 | wind | 5.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 857 | 81.42 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 7 |
| 859 | 81.43 | wind | 5.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 905 | 81.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 907 | 81.51 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 934 | 81.55 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 938 | 81.56 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 943 | 81.57 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 965 | 81.59 | wind | 7.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 972 | 81.63 | humidity | 70.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 993 | 81.68 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 11 |