BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0190000 Os01g0190000|Os01g0190000
         (335 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0190000  Taurine catabolism dioxygenase TauD/TfdA famil...   556   e-159
Os08g0383901                                                      117   1e-26
Os08g0383800                                                       91   2e-18

>Os01g0190000 Taurine catabolism dioxygenase TauD/TfdA family protein
          Length = 335

 Score =  556 bits (1433), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 281/335 (83%), Positives = 281/335 (83%)

Query: 1   MVAPAGSFFQEAALPEQRLVEGXXXXXXXXXXXXXXXXXXXXXXXXXXVRSERASTVEPX 60
           MVAPAGSFFQEAALPEQRLVEG                          VRSERASTVEP 
Sbjct: 1   MVAPAGSFFQEAALPEQRLVEGVAFPAVLVPSAAAAAAGGGLDAFLDAVRSERASTVEPL 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXGYAELPYVGGAAPRSNVVGRVFTANESPPDQKI 120
                                      GYAELPYVGGAAPRSNVVGRVFTANESPPDQKI
Sbjct: 61  LRGAGAVLLRGFPARAAADFDRAVDAFGYAELPYVGGAAPRSNVVGRVFTANESPPDQKI 120

Query: 121 PFHHEMAQVPTFPAKLFFFCEVEPKIGGETPIVLSHYVYKRMKEKYPEFVEKLEKDGLIY 180
           PFHHEMAQVPTFPAKLFFFCEVEPKIGGETPIVLSHYVYKRMKEKYPEFVEKLEKDGLIY
Sbjct: 121 PFHHEMAQVPTFPAKLFFFCEVEPKIGGETPIVLSHYVYKRMKEKYPEFVEKLEKDGLIY 180

Query: 181 TRVLGEGDDPSSPIGRGWHSTFLTKDKSIAEERAAKLGMKLEWTEDGVKTIMGPIPAVKW 240
           TRVLGEGDDPSSPIGRGWHSTFLTKDKSIAEERAAKLGMKLEWTEDGVKTIMGPIPAVKW
Sbjct: 181 TRVLGEGDDPSSPIGRGWHSTFLTKDKSIAEERAAKLGMKLEWTEDGVKTIMGPIPAVKW 240

Query: 241 DESRGRKIWFNSMVAAYTGWKDARNDPVRAVTFGDGSPLPADVIAGCGEILEEECVAVPW 300
           DESRGRKIWFNSMVAAYTGWKDARNDPVRAVTFGDGSPLPADVIAGCGEILEEECVAVPW
Sbjct: 241 DESRGRKIWFNSMVAAYTGWKDARNDPVRAVTFGDGSPLPADVIAGCGEILEEECVAVPW 300

Query: 301 RQGDILLIDNWAVLHSRRSFEPPRRILASLCKNPE 335
           RQGDILLIDNWAVLHSRRSFEPPRRILASLCKNPE
Sbjct: 301 RQGDILLIDNWAVLHSRRSFEPPRRILASLCKNPE 335



>Os08g0383901 
          Length = 209

 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/126 (49%), Positives = 82/126 (65%), Gaps = 1/126 (0%)

Query: 88  GYAELPYVGGAAPRSNVVGRVFTANESPPDQKIPFHHEMAQVPTFPAKLFFFCEVEPKIG 147
           G+ ++ YVG  APR++V GRV+TANE P D+ I +HHEM  +  FP K+  FCEV P  G
Sbjct: 85  GWPDIRYVG-PAPRTHVHGRVWTANEGPLDEFIYYHHEMVLIKEFPGKVILFCEVAPPEG 143

Query: 148 GETPIVLSHYVYKRMKEKYPEFVEKLEKDGLIYTRVLGEGDDPSSPIGRGWHSTFLTKDK 207
           GETP V S  V +R+ E++PE VE+L++ GL YT      +D  S  GRGW   F T DK
Sbjct: 144 GETPFVPSFRVTERVMEEFPEMVEELDEKGLRYTFTALSKNDTKSMRGRGWEDAFATTDK 203

Query: 208 SIAEER 213
           + AE+R
Sbjct: 204 AEAEKR 209



>Os08g0383800 
          Length = 109

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 9/116 (7%)

Query: 219 MKLEWTEDG-VKTIMGPIPAVKWDESR-GRKIWFNSMVAAYTGWKDARNDPVRAVTFGDG 276
           M++EW  +G  +TI+GP    +    R GR++WFN++V  +          + + T  DG
Sbjct: 1   MEVEWLANGGARTILGPRKLTRVFPGRQGRRMWFNTVVGMH-------GKALSSATMADG 53

Query: 277 SPLPADVIAGCGEILEEECVAVPWRQGDILLIDNWAVLHSRRSFEPPRRILASLCK 332
           + +P   +A CGEI+EEE +   W  GD+L++DN A LH RR   PPRR+L + CK
Sbjct: 54  AEIPTAFVARCGEIIEEESIQFRWEVGDVLILDNLATLHGRRPSLPPRRVLVATCK 109



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.137    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,255,889
Number of extensions: 491504
Number of successful extensions: 1068
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1065
Number of HSP's successfully gapped: 3
Length of query: 335
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 234
Effective length of database: 11,762,187
Effective search space: 2752351758
Effective search space used: 2752351758
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)