Os01g0188900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ankyrin-like protein-like protein.
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Os01g0188900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ankyrin-like protein-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.17 | 0.544 | 10.3 | 0.307 | 1.74 | 2.06 | 0.00216 | -1.35 | 0.946 | 20.3 | 17.1 | 10 | 8.97 | 20 |
| 136.47 | 0.544 | 10.3 | 0.47 | 1.73 | 1.98 | -0.112 | -- | 0.991 | 20.2 | 16.3 | 13 | 8.97 | 20 |
| 134.14 | 0.539 | 10.3 | 0.297 | 1.74 | 2.06 | -- | -1.38 | 0.937 | 20.3 | 17.11 | 12 | 8.95 | 20 |
| 136.35 | 0.544 | 10.3 | 0.471 | 1.71 | 2 | -- | -- | 0.997 | 20.2 | 16.19 | 13 | 8.97 | 20 |
| 176.92 | 0.619 | 10.2 | 0.62 | -- | 3 | -- | 0.207 | 1.18 | -- | 7.381 | 221 | 9.1 | 17.6 |
| 206.91 | 0.674 | 10.2 | 0.861 | 2.39 | -- | -0.503 | -- | 1.17 | 18.9 | -- | -- | -- | -- |
| 207.55 | 0.675 | 10.2 | 0.869 | 2.39 | -- | -- | -- | 1.17 | 18.9 | -- | -- | -- | -- |
| 162.37 | 0.593 | 10.2 | 0.592 | -- | 3.29 | -- | -- | 1.21 | -- | 5.066 | 324 | 7.92 | 18 |
| 141.71 | 0.554 | 10.3 | -- | 1.75 | 2.13 | -- | -- | 0.938 | 20.3 | 16.66 | 13 | 8.95 | 20.6 |
| 507.57 | 1.05 | 10.2 | 0.819 | -- | -- | -- | -- | 1.13 | -- | -- | -- | -- | -- |
| 227.47 | 0.706 | 10.2 | -- | 2.38 | -- | -- | -- | 1.07 | 18.9 | -- | -- | -- | -- |
| 160.1 | 0.589 | 10.2 | -- | -- | 3.27 | -- | -- | 0.974 | -- | 2.798 | 402 | 6.78 | 18.5 |
| 525.26 | 1.07 | 10.2 | -- | -- | -- | -- | -- | 1.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.16 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 24 | 144.18 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 31 | 144.74 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 16 |
| 83 | 150.90 | temperature | 20 | 270 | > th | dose dependent | sin | 9 | NA |
| 90 | 151.36 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 104 | 152.34 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 115 | 152.81 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 20 |
| 126 | 153.25 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 139 | 153.92 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 167 | 155.40 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 178 | 155.85 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 20 |
| 185 | 156.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 189 | 156.23 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 210 | 156.73 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 217 | 156.86 | temperature | 30 | 90 | < th | dose dependent | sin | 3 | NA |
| 225 | 157.08 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 233 | 157.22 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 23 |
| 243 | 157.55 | temperature | 20 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 246 | 157.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 17 |
| 283 | 158.27 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 22 |
| 295 | 158.44 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 353 | 159.20 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 357 | 159.26 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 364 | 159.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 393 | 159.76 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 5 |
| 403 | 159.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 418 | 160.01 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 8 |
| 431 | 160.08 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 22 |
| 443 | 160.18 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 23 |
| 462 | 160.29 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 21 |
| 492 | 160.53 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 496 | 160.58 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 504 | 160.62 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 10 |
| 524 | 160.75 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 544 | 160.83 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 19 |
| 555 | 160.87 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 645 | 161.42 | temperature | 25 | 270 | < th | dose independent | no | NA | NA |
| 668 | 161.54 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 669 | 161.55 | temperature | 20 | 4320 | < th | dose independent | sin | 11 | NA |
| 676 | 161.59 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 23 |
| 693 | 161.68 | temperature | 20 | 4320 | > th | dose independent | sin | 11 | NA |
| 698 | 161.69 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 748 | 161.89 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 782 | 162.04 | temperature | 25 | 270 | > th | dose independent | rect. | 20 | 23 |
| 877 | 162.44 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 20 |
| 881 | 162.45 | temperature | 25 | 270 | > th | dose independent | no | NA | NA |
| 892 | 162.47 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 957 | 162.71 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |