Os01g0184700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0184700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.6 | 0.606 | 3.93 | 1.93 | 0.125 | -69.7 | 0.0482 | -145 | 0.104 | 0.099 | 15 | 718 | -- | -- |
| 171.78 | 0.615 | 3.03 | -0.0484 | 0.123 | 0.0865 | -0.0319 | -- | 0.0826 | 0.15 | 15 | 718 | -- | -- |
| 166.61 | 0.601 | 3.93 | 1.92 | 0.125 | -69.6 | -- | -145 | 0.104 | 0.0952 | 15 | 717 | -- | -- |
| 170.75 | 0.609 | 3.04 | 0.00231 | 0.151 | -0.336 | -- | -- | 0.0667 | 23.4 | 16.4 | 842 | -- | -- |
| 167.56 | 0.603 | 3.9 | 1.88 | -- | -69.5 | -- | -145 | 0.107 | -- | 15 | 696 | -- | -- |
| 171.8 | 0.614 | 3.03 | -0.0447 | 0.121 | -- | -0.0216 | -- | 0.0835 | 0.149 | -- | -- | -- | -- |
| 171.8 | 0.614 | 3.03 | -0.0438 | 0.121 | -- | -- | -- | 0.0836 | 0.145 | -- | -- | -- | -- |
| 170.37 | 0.608 | 3.03 | 0.148 | -- | -0.623 | -- | -- | 0.131 | -- | 15.37 | 3260 | -- | -- |
| 169.64 | 0.607 | 3.01 | -- | 0.13 | -0.393 | -- | -- | 0.105 | 0.419 | 15.27 | 3420 | -- | -- |
| 172.73 | 0.614 | 3.02 | -0.0399 | -- | -- | -- | -- | 0.0854 | -- | -- | -- | -- | -- |
| 171.85 | 0.613 | 3.02 | -- | 0.121 | -- | -- | -- | 0.0885 | 0.125 | -- | -- | -- | -- |
| 170.46 | 0.608 | 3.02 | -- | -- | -0.499 | -- | -- | 0.111 | -- | 15.29 | 3426 | -- | -- |
| 172.77 | 0.614 | 3.02 | -- | -- | -- | -- | -- | 0.0899 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 160.27 | wind | 3.0 | 10 | < th | dose independent | rect. | 20 | 4 |
| 2 | 160.46 | wind | 3.0 | 10 | < th | dose independent | rect. | 22 | 2 |
| 4 | 160.83 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 22 | 3 |
| 16 | 160.86 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 9 | 4 |
| 17 | 160.87 | temperature | 15.0 | 720 | < th | dose independent | rect. | 18 | 7 |
| 24 | 160.88 | temperature | 15.0 | 720 | < th | dose independent | rect. | 23 | 2 |
| 30 | 160.91 | temperature | 20.0 | 90 | < th | dose independent | rect. | 9 | 2 |
| 31 | 160.98 | temperature | 20.0 | 10 | < th | dose independent | rect. | 9 | 3 |
| 41 | 161.37 | temperature | 15.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 43 | 161.37 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 62 | 161.86 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 21 | 1 |
| 90 | 162.43 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 3 |
| 92 | 162.44 | temperature | 15.0 | 720 | < th | dose independent | rect. | 23 | 12 |
| 126 | 162.68 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 4 |
| 129 | 162.72 | humidity | 80.0 | 270 | > th | dose independent | rect. | 20 | 1 |
| 161 | 163.06 | wind | 5.0 | 10 | < th | dose dependent | rect. | 20 | 4 |
| 175 | 163.17 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 19 | 2 |
| 176 | 163.20 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 4 |
| 193 | 163.34 | temperature | 15.0 | 720 | < th | dose dependent | sin | 5 | NA |
| 201 | 163.45 | temperature | 15.0 | 720 | < th | dose independent | sin | 7 | NA |
| 224 | 163.56 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 291 | 163.70 | wind | 3.0 | 10 | < th | dose independent | rect. | 14 | 10 |
| 294 | 163.75 | wind | 5.0 | 270 | < th | dose independent | rect. | 20 | 1 |
| 299 | 163.83 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 24 | 20 |
| 301 | 163.85 | temperature | 15.0 | 720 | > th | dose independent | sin | 7 | NA |
| 302 | 163.85 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 4 |
| 386 | 164.14 | wind | 7.0 | 270 | < th | dose dependent | rect. | 20 | 1 |
| 418 | 164.26 | temperature | 15.0 | 720 | > th | dose independent | rect. | 23 | 4 |
| 426 | 164.28 | wind | 7.0 | 270 | < th | dose dependent | rect. | 19 | 4 |
| 434 | 164.38 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 20 | 1 |
| 437 | 164.40 | wind | 5.0 | 270 | < th | dose independent | rect. | 19 | 4 |
| 447 | 164.47 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 4 |
| 449 | 164.47 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 24 | 20 |
| 464 | 164.56 | wind | 1.0 | 30 | > th | dose independent | rect. | 20 | 4 |
| 480 | 164.63 | wind | 9.0 | 10 | < th | dose independent | rect. | 24 | 20 |
| 481 | 164.63 | radiation | 10.0 | 10 | < th | dose independent | rect. | 24 | 20 |
| 496 | 164.72 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 5 | 3 |
| 518 | 164.78 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 21 | 4 |
| 523 | 164.81 | temperature | 20.0 | 30 | > th | dose independent | rect. | 24 | 20 |
| 524 | 164.81 | temperature | 15.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 526 | 164.82 | humidity | 60.0 | 270 | < th | dose independent | rect. | 18 | 1 |
| 533 | 164.84 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 18 | 1 |
| 536 | 164.85 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 8 | 3 |
| 545 | 164.85 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 1 |
| 572 | 164.91 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 575 | 164.91 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 4 |
| 576 | 164.91 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 580 | 164.91 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 4 |
| 583 | 164.91 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 590 | 164.91 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 591 | 164.91 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 4 |
| 596 | 164.91 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 616 | 164.91 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 4 |
| 617 | 164.91 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 20 |
| 620 | 164.91 | temperature | 10.0 | 30 | > th | dose independent | rect. | 24 | 20 |
| 621 | 164.91 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 4 |
| 631 | 164.91 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 4 |
| 639 | 164.93 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 671 | 164.97 | wind | 5.0 | 10 | < th | dose dependent | rect. | 22 | 2 |
| 673 | 164.98 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 24 | 20 |
| 674 | 164.98 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 24 | 20 |
| 676 | 164.99 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 24 | 11 |
| 680 | 165.00 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 20 | 1 |
| 683 | 165.01 | wind | 5.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 686 | 165.02 | humidity | 80.0 | 270 | > th | dose independent | rect. | 19 | 4 |
| 687 | 165.02 | wind | 3.0 | 10 | < th | dose independent | rect. | 8 | 16 |
| 690 | 165.04 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 24 | 20 |
| 714 | 165.11 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 22 | 1 |
| 737 | 165.17 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 22 | 2 |
| 744 | 165.19 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 4 |
| 769 | 165.24 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 4 |
| 776 | 165.25 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 823 | 165.34 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 824 | 165.34 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 884 | 165.35 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 20 | 4 |
| 923 | 165.42 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 16 |
| 933 | 165.45 | radiation | 20.0 | 10 | < th | dose independent | rect. | 24 | 8 |
| 941 | 165.46 | temperature | 15.0 | 720 | > th | dose independent | sin | 13 | NA |
| 962 | 165.49 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 967 | 165.50 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 974 | 165.53 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 9 |
| 978 | 165.54 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 994 | 165.60 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 7 | 17 |
| 996 | 165.60 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 6 |
| 1000 | 165.62 | wind | 1.0 | 270 | > th | dose independent | rect. | 20 | 1 |