Os01g0183800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0183800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF295 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.8 | 0.265 | 11.3 | 0.766 | 0.843 | 0.499 | -0.084 | 0.208 | 0.586 | 1.58 | 71 | 1250 | -- | -- |
| 31.88 | 0.263 | 11.3 | 0.797 | 0.842 | 0.51 | -0.116 | -- | 0.595 | 1.59 | 71.02 | 1249 | -- | -- |
| 31.82 | 0.263 | 11.3 | 0.765 | 0.844 | 0.499 | -- | 0.234 | 0.586 | 1.57 | 71.3 | 1249 | -- | -- |
| 31.93 | 0.263 | 11.3 | 0.803 | 0.844 | 0.514 | -- | -- | 0.597 | 1.58 | 71.03 | 1249 | -- | -- |
| 48.02 | 0.325 | 11.3 | 0.776 | -- | 0.495 | -- | -0.151 | 0.555 | -- | 75 | 1704 | -- | -- |
| 41.03 | 0.3 | 11.3 | 0.691 | 0.735 | -- | -0.216 | -- | 0.521 | 1.66 | -- | -- | -- | -- |
| 41.21 | 0.301 | 11.3 | 0.698 | 0.735 | -- | -- | -- | 0.522 | 1.64 | -- | -- | -- | -- |
| 48.16 | 0.325 | 11.3 | 0.77 | -- | 0.495 | -- | -- | 0.553 | -- | 75 | 1704 | -- | -- |
| 48.24 | 0.323 | 11.3 | -- | 0.731 | 0.57 | -- | -- | 0.548 | 1.29 | 75 | 3418 | -- | -- |
| 74.18 | 0.402 | 11.3 | 0.728 | -- | -- | -- | -- | 0.538 | -- | -- | -- | -- | -- |
| 54.06 | 0.344 | 11.3 | -- | 0.748 | -- | -- | -- | 0.444 | 1.67 | -- | -- | -- | -- |
| 63.66 | 0.373 | 11.3 | -- | -- | 0.479 | -- | -- | 0.459 | -- | 75.22 | 1710 | -- | -- |
| 88.15 | 0.438 | 11.3 | -- | -- | -- | -- | -- | 0.458 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.65 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 7 | 31.04 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 15 | 31.24 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 28 | 31.39 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 36 | 31.45 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 41 | 31.49 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 44 | 31.51 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 46 | 31.51 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 76 | 31.69 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 12 |
| 80 | 31.71 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 116 | 31.89 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 132 | 31.95 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 158 | 32.01 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 4 | NA |
| 230 | 32.23 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 18 | 19 |
| 245 | 32.28 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 256 | 32.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 257 | 32.32 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 259 | 32.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 264 | 32.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 267 | 32.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 333 | 32.50 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 440 | 32.70 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 18 |
| 475 | 32.74 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 477 | 32.74 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 556 | 32.84 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 580 | 32.87 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 588 | 32.88 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 664 | 32.94 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 23 |
| 683 | 32.96 | humidity | 70.0 | 1440 | > th | dose independent | no | NA | NA |
| 729 | 32.96 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 846 | 33.02 | humidity | 80.0 | 1440 | < th | dose dependent | no | NA | NA |
| 862 | 33.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 869 | 33.03 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 5 | 22 |
| 872 | 33.03 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 876 | 33.03 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 879 | 33.04 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 897 | 33.04 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 954 | 33.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 960 | 33.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |