BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0183800 Os01g0183800|AK106385
(365 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G17565.1 | chr4:9782508-9783644 REVERSE LENGTH=379 58 6e-09
AT1G57790.1 | chr1:21404578-21405636 REVERSE LENGTH=353 54 1e-07
AT4G22180.1 | chr4:11738574-11739782 FORWARD LENGTH=403 54 1e-07
AT2G33200.1 | chr2:14069541-14070671 FORWARD LENGTH=377 54 1e-07
AT2G05970.1 | chr2:2308651-2309784 REVERSE LENGTH=378 54 2e-07
AT3G56470.1 | chr3:20934815-20936017 FORWARD LENGTH=368 53 2e-07
>AT4G17565.1 | chr4:9782508-9783644 REVERSE LENGTH=379
Length = 378
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 148/331 (44%), Gaps = 36/331 (10%)
Query: 7 RRLEANSVGMADWAGLQTDILGVIVKKLAVPDYLRFRAVCTSWNHLCRDVFNCPRIDPWL 66
RRL + W+ L D+L I ++L+ + R + VC SWN R PW+
Sbjct: 10 RRLRV----IPKWSELCPDLLRSIFEQLSFTNLNRAKLVCRSWNSASRGCVPKRNQIPWM 65
Query: 67 ML-PTNALNDSKFLC---VPERKNQTIRLPSTVTIFGSTWIPVGSSHGWLIFYSPSHGTM 122
+L P + N+S C VP+ ++ + F + I + + WL+ ++ +
Sbjct: 66 ILFPQKSENNSSNNCVLFVPDDNDKVYKTRDLGVDFAQS-ICLATYGSWLLMFNHLRN-L 123
Query: 123 QLVNPISGMQFNLPP---------IGRRAFSKAMLLDMNDTNFTVAVILRDQKGYKVTRK 173
++NP++ + +LP + ++ L +N+ V+ T+K
Sbjct: 124 YILNPLTLERIDLPHSTSINPNMCYPNFKYYRSACLWINNITKDYLVVWPIYNKCFFTKK 183
Query: 174 GSNSWSSVESKHDLVD---IFKHR-RQLYTVDIYGTVQLW---AEPPRSWPDEDAPQVND 226
G ++W + H + I+ H+ ++Y YG + +W ++ P D+ P V+
Sbjct: 184 GDDTWRFAPACHIRMKDQIIYNHKDHKVYQYASYGFIYVWDFSSDIPHV--DKHLPAVSF 241
Query: 227 PYHNLIHYPHQHGKL-NCLVESPAGDLMRVKRQ-----SNDKFVVWILDKGTFSWEKVDN 280
I +++ ++ + +V S +G+++ VK S +F ++ L+ T W KVD+
Sbjct: 242 ISGREIGDKNKYYRISHQMVMSLSGEVVVVKIMHYYDLSRWRFRIFELNPLTQRWVKVDS 301
Query: 281 IGDFALFVSYYSSVCYRAKDHLNLKSNCVYF 311
+GD A+ + +V AKD +K N +YF
Sbjct: 302 LGDAAIILDMGITVV--AKDIPGIKKNSIYF 330
>AT1G57790.1 | chr1:21404578-21405636 REVERSE LENGTH=353
Length = 352
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 114/304 (37%), Gaps = 25/304 (8%)
Query: 19 WAGLQTDILGVIVKKLAVPDYLRFRAVCTSWNHLCRDVFNCPRIDPWLMLPTNALNDSKF 78
W L ++L ++ L + D +R VC SW V + PWLM N F
Sbjct: 13 WKDLPLELLSSVMTFLEIKDNVRASVVCKSWFEAAVSVRVIDK-SPWLMYFPETKNTYDF 71
Query: 79 LCVPERKNQTIRLPSTVTIFGSTWIPVGSSHGWLIFYSPSHGTMQLVNPISGMQFNLPPI 138
K T+ LP ++ F I S GWL+ L NP + LP +
Sbjct: 72 YDPSNCKKYTMELPKSLVGF----IVRYSKDGWLLMSQEDSSHFVLFNPFTMDVVALPFL 127
Query: 139 GRRAFSKAMLLDMNDTNFTVAVI-LRDQKGYKVTRK----GSNSWSSVESKHDLVDIFKH 193
+ + + T+ V ++D VT + G W+S++ + +D+ H
Sbjct: 128 HLFTYYQLVGFSSAPTSSECVVFTIKDYDPGHVTIRTWSPGQTMWTSMQVESQFLDV-DH 186
Query: 194 RRQLYTVDIY------GTVQLWAEPPRSWPDEDAPQVNDPYHNLIHYPHQHGKLNCLVES 247
+++ ++ V ++ R+W D P P GK +
Sbjct: 187 NNVVFSNGVFYCLNQRNHVAVFDPSLRTWNVLDVPPPRCPDDK----SWNEGKF---MVG 239
Query: 248 PAGDLMRVKRQSNDKFVVWILDKGTFSWEKVDNIGDFALFVSYYSSVCYRAKDHLNLKSN 307
GD++ ++ N +V+ LD WE+ D +G +FVS S R + N
Sbjct: 240 YKGDILVIRTYENKDPLVFKLDLTRGIWEEKDTLGSLTIFVSRKSCES-RTYVKDGMLRN 298
Query: 308 CVYF 311
VYF
Sbjct: 299 SVYF 302
>AT4G22180.1 | chr4:11738574-11739782 FORWARD LENGTH=403
Length = 402
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 147/364 (40%), Gaps = 57/364 (15%)
Query: 6 PRRLEANSVGMADWAGLQTDILGVIVKKLAVPDYLRFRAVCTSWNHLCRDVFNCPRIDPW 65
P+RL ++ W+ L D+L + ++L+ ++ R ++VC+SW+ R + P PW
Sbjct: 10 PKRLRGDTPN--SWSELPLDLLTAVFERLSYANFQRAKSVCSSWHSGSRQ--SVPIQIPW 65
Query: 66 LML-PTNALNDSKFLCVPERKNQTIRLPSTVTIFGSTWIPVGSSHGWLIFYSPSHGTMQL 124
L+L P N+S L PE K Q ++ F + + + WL+ P + + +
Sbjct: 66 LILFPEYDNNNSCTLFNPEEKGQVYKMKDLGVEFSKS-VCTATYGSWLLMRDPLYN-LYI 123
Query: 125 VNPISGMQFNLPP----IGRRAFSKAML------LDMNDTNF--------TVAVILRDQK 166
+N + + NLPP +G + + L N + TV I K
Sbjct: 124 LNLFTHERVNLPPFESQLGMVKIERTIYDWFHSTLHYNGKEYHKRIRILSTVFWIDEKTK 183
Query: 167 GYKV-----------TRKGSNSWSSV-ESKHDLVDIFKHRRQLYTVDIYGTVQLWAEPPR 214
Y V ++KG W+ + E+ + ++K + ++ Y + R
Sbjct: 184 DYVVIWGLGSSCVVYSKKGDKCWNQIPETSNCHHMVYKDHKLYFSTSTYKYEFRIFDFSR 243
Query: 215 SWPDE--------DAPQVNDPYHNLIHYPHQHGKLNCLVESPAGDLMRVKRQSNDK---- 262
P + +N + YP LV + GD+++V R +
Sbjct: 244 EIPQQIFQGYVIMQGLTLNR-HRGQPGYPFATIDTK-LVVTVTGDVLKVDRIVEKETRIC 301
Query: 263 ---FVVWILDKGTF-SWEKVDNIGDFALFVSYYSSVCYRAKDHLNLKSNCVYFIDSYSNL 318
+V + G++ +EKV+++GD A+ + + A D + L N +YF +++
Sbjct: 302 RFFYVYKVYSSGSYKKYEKVESLGDEAILLDL--GITMLANDTVGLLGNSIYFSGTHTKS 359
Query: 319 CAFN 322
N
Sbjct: 360 KVIN 363
>AT2G33200.1 | chr2:14069541-14070671 FORWARD LENGTH=377
Length = 376
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 136/331 (41%), Gaps = 49/331 (14%)
Query: 18 DWAGLQTDILGVIVKKLAVPDYLRFRAVCTSWNHLCRDVFNCPR-IDPWLMLPTNALNDS 76
DW+ L DIL +I++ L DY R R VC++W C R + PW + N ++ S
Sbjct: 7 DWSKLCHDILRLILESLHYKDYHRARTVCSNWYTAST---TCKRPLYPW-RIKFNKISTS 62
Query: 77 KFLCVPERKNQTIRLPSTVTIFGSTWIPVGSSHGWLIFYSPSHGTMQLVNPISGMQFNLP 136
F E K I+ P I S + S W + S L+N + + NLP
Sbjct: 63 LF-DPREDKIHEIQHPG---IEFSDRNVLASCSNWFLMVD-SGLEFYLLNAFTRERINLP 117
Query: 137 PIGRRAFSKAML------------LDMNDTNFTVAVILRDQKGYKVT------------R 172
+ K L D+ T + + ++ G V +
Sbjct: 118 SMESSILGKERLEKEVAWKHFIERTDIISTKKQACLWINERTGDYVVAWSIKQHYLFTYK 177
Query: 173 KGSNSWSSVESKHDLVDIFKHRRQLYTVDIYGTVQ---LWAEPPRSWPDEDAPQVNDPY- 228
KG +SW ++E + +LY + +++ L+ E P +E+ P N P+
Sbjct: 178 KGDDSWLNLEGTKCVSMALNKDYKLYVYALDNSIKIFDLYGEFPSEIVEEN-PYRNHPFS 236
Query: 229 HNLIHYPHQHGKLNCLVESPAGDLMRVK--RQSNDK--FVVWILDKGTFSWEKVDNIGDF 284
+ P +H + + +G+++ + + DK F ++ +D G+ +WE+VD++G
Sbjct: 237 FRFVSKPEEHAWKQVVAITNSGEVLMIVSLKGLEDKRLFYIYKMDFGSCNWERVDSLGGE 296
Query: 285 ALFVSYYSSVCYRAK----DHLNLKSNCVYF 311
L + V RA + L +KS+ + F
Sbjct: 297 MLIFGH--GVTIRAPILDINGLGIKSDSICF 325
>AT2G05970.1 | chr2:2308651-2309784 REVERSE LENGTH=378
Length = 377
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 144/325 (44%), Gaps = 38/325 (11%)
Query: 17 ADWAGLQTDILGVIVKKLAVPDYLRFRAVCTSWNHLCRDVFNCPRIDPWLML-----PTN 71
A W+ L D+L + + L+ D R R+VC+SW+ R PWL+L N
Sbjct: 8 ASWSELCPDVLRCVFELLSFSDLNRTRSVCSSWHSASRHCVPTQNQIPWLILFPRNNVNN 67
Query: 72 ALNDSKFLCVPERKNQTIRLPSTVTIFGSTWIPVGSSHGWLIFYSPSHGTMQLVNPISGM 131
N+S L VP+ ++ + F + +++G I + ++NP++G
Sbjct: 68 NNNNSCVLFVPDDRDSLYKTKDLGVGFMLS--NCLATYGSWILMMDRLCNLNILNPLTGE 125
Query: 132 QFNLP----PIGRRAFSKAML-LDMNDTNFTVAVILRDQKGYKVTRKGSNSWSSVESKHD 186
+ +LP + R S A L +D ++ V +++ Y +KG+++W V S ++
Sbjct: 126 KIDLPRTKFDLPRLESSVACLWIDEKTKDYIVVWKIKNSLVY--AKKGNHTWQQVFSMNE 183
Query: 187 LVD----IFKHRRQ-LYTVDIYGTVQLW----AEP--------PRSWPDEDAPQVNDPYH 229
+ +++H+ Q LY T+ +W +P P + +D
Sbjct: 184 ELSVEQIVYEHKTQKLYVHFNDSTLSIWRLSREDPHGVFENYIPFDFVFQDFLPDRRTDE 243
Query: 230 NLIHYPHQHGKLNCLVESPAGDLMR----VKRQSNDKFVVWILDKGTFSWEKVDNIGDFA 285
L + +LN + + +G+L++ V++ F ++ ++ WE+++++GD A
Sbjct: 244 ELYVKEYIDTRLN-IALTTSGELLKVASVVQKSKRWLFRIYKMNYIKRRWERIESLGDEA 302
Query: 286 LFVSYYSSVCYRAKDHLNLKSNCVY 310
L + ++ AKD LK N +Y
Sbjct: 303 LILDMGITIV--AKDIPGLKRNSIY 325
>AT3G56470.1 | chr3:20934815-20936017 FORWARD LENGTH=368
Length = 367
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 123/328 (37%), Gaps = 50/328 (15%)
Query: 21 GLQTDILGVIVKKLAVPDYLRFRAVCTSWNHLCRDVFNCPRIDPWLMLPTNALNDSKFLC 80
L D+L +++ +L + D +R AVC +W+ C + PWL+ + +DS L
Sbjct: 31 NLPCDLLQLVISRLPLKDNIRASAVCKTWHEACVSL-RVIHTSPWLIYFSKT-DDSYELY 88
Query: 81 VPE-RKNQTIRLPSTVTIFGSTWIPVGSSHGWLIFYSPSHGTMQLVNPISGMQFNLPPIG 139
P +KN + P S + S GWL+ Y+P+ + NP + +P +
Sbjct: 89 DPSMQKNCNLHFPEL-----SGFRVCYSKDGWLLMYNPNSYQLLFFNPFTRDCVPMPTLW 143
Query: 140 RRAFSKAMLLDMNDTN-----FTVAVILRDQKGYKVTRKGSNSWSSVESKHDLVDIFKHR 194
A+ + M T+ FTV + + K + W + K+ L F
Sbjct: 144 -MAYDQRMAFSCAPTSTSCLLFTVTSVTWNYITIKTYFANAKEWKTSVFKNRLQRNFNTF 202
Query: 195 RQL-------YTVDIYGTVQLWAEPPRSWPDEDAPQVNDPYHNLI--HYPHQHGKLNCLV 245
Q+ Y + G + L+ P +N Y N++ P + G C +
Sbjct: 203 EQIVFSNGVFYCLTNTGCLALF-----------DPSLN--YWNVLPGRPPKRPGSNGCFM 249
Query: 246 ESPAGDLMRVKRQSNDKFVVWILDKGTFSWEKVDNIGDFALFVSYYSSV----------- 294
G++ + + V LD +F W + +G ++ S SS
Sbjct: 250 TEHQGEIFLIYMYRHMNPTVLKLDLTSFEWAERKTLGGLTIYASALSSESRAEQQKQSGI 309
Query: 295 --CYRAKDHLNLKSNCVYF-IDSYSNLC 319
C K C+Y+ +D S +C
Sbjct: 310 WNCLCLSVFHGFKRTCIYYKVDEESEVC 337
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.137 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,527,170
Number of extensions: 370370
Number of successful extensions: 910
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 918
Number of HSP's successfully gapped: 8
Length of query: 365
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 265
Effective length of database: 8,364,969
Effective search space: 2216716785
Effective search space used: 2216716785
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 112 (47.8 bits)