Os01g0183000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to GmCK3p (EC 2.7.1.32) (Fragment).
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Os01g0183000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to GmCK3p (EC 2.7.1.32) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.34 | 0.271 | 9.32 | -0.441 | 0.392 | 1.08 | -0.0273 | -1.67 | -0.302 | 5.81 | 12.12 | 669 | -- | -- |
| 35.27 | 0.277 | 9.28 | -0.162 | 0.405 | 1.1 | 0.372 | -- | -0.229 | 6.04 | 12.44 | 659 | -- | -- |
| 33.34 | 0.269 | 9.32 | -0.439 | 0.393 | 1.09 | -- | -1.66 | -0.302 | 5.83 | 12.02 | 669 | -- | -- |
| 35.47 | 0.277 | 9.28 | -0.145 | 0.407 | 1.07 | -- | -- | -0.225 | 5.78 | 10.55 | 654 | -- | -- |
| 36.13 | 0.28 | 9.32 | -0.446 | -- | 0.947 | -- | -1.4 | -0.296 | -- | 7.284 | 1118 | -- | -- |
| 48.58 | 0.327 | 9.25 | 0.104 | 0.225 | -- | -0.472 | -- | -0.0642 | 2.51 | -- | -- | -- | -- |
| 49.26 | 0.329 | 9.25 | 0.116 | 0.233 | -- | -- | -- | -0.0619 | 3.27 | -- | -- | -- | -- |
| 37.75 | 0.286 | 9.29 | -0.155 | -- | 0.93 | -- | -- | -0.221 | -- | 5.448 | 1172 | -- | -- |
| 35.95 | 0.279 | 9.27 | -- | 0.41 | 1.01 | -- | -- | -0.2 | 5.58 | 11.07 | 616 | -- | -- |
| 52.33 | 0.338 | 9.25 | 0.125 | -- | -- | -- | -- | -0.0558 | -- | -- | -- | -- | -- |
| 49.62 | 0.329 | 9.25 | -- | 0.235 | -- | -- | -- | -0.0748 | 3.27 | -- | -- | -- | -- |
| 38.31 | 0.288 | 9.28 | -- | -- | 0.867 | -- | -- | -0.194 | -- | 7.322 | 1153 | -- | -- |
| 52.74 | 0.339 | 9.25 | -- | -- | -- | -- | -- | -0.0697 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 11 | 32.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 12 | 32.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 40 | 33.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 43 | 33.38 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 46 | 33.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 51 | 33.41 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 52 | 33.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 23 |
| 64 | 33.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 88 | 33.61 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 89 | 33.61 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 120 | 33.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 121 | 33.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 140 | 33.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 150 | 33.94 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 155 | 33.97 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 22 |
| 173 | 34.05 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 197 | 34.14 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 22 |
| 198 | 34.14 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 205 | 34.15 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 232 | 34.24 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 252 | 34.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 268 | 34.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 276 | 34.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 351 | 34.46 | temperature | 10 | 1440 | > th | dose dependent | sin | 22 | NA |
| 409 | 34.52 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 498 | 34.63 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 502 | 34.63 | temperature | 30 | 90 | < th | dose dependent | rect. | 22 | 23 |
| 519 | 34.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 648 | 34.83 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 726 | 34.92 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 727 | 34.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 736 | 34.94 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 753 | 34.97 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 848 | 35.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 888 | 35.13 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 911 | 35.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 5 |
| 995 | 35.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 13 |