Os01g0178200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF92, transmembrane family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0178200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF92, transmembrane family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.26 | 0.38 | 7.41 | 0.955 | 0.661 | 1.08 | -0.591 | -1.24 | 0.399 | 8.62 | 21.2 | 1002 | -- | -- |
| 69.01 | 0.387 | 7.38 | 1.25 | 0.659 | 1.18 | -0.297 | -- | 0.453 | 8.59 | 21.3 | 1032 | -- | -- |
| 66.31 | 0.379 | 7.4 | 0.973 | 0.66 | 1.1 | -- | -1.07 | 0.406 | 8.52 | 21.2 | 1020 | -- | -- |
| 69.26 | 0.388 | 7.37 | 1.25 | 0.661 | 1.16 | -- | -- | 0.462 | 8.53 | 21.32 | 1028 | -- | -- |
| 86.04 | 0.432 | 7.45 | 0.775 | -- | 1.07 | -- | -1.31 | 0.374 | -- | 21.4 | 2728 | -- | -- |
| 111.94 | 0.496 | 7.3 | 1.71 | 0.562 | -- | -0.287 | -- | 0.784 | 7.71 | -- | -- | -- | -- |
| 112.17 | 0.496 | 7.3 | 1.7 | 0.561 | -- | -- | -- | 0.785 | 7.7 | -- | -- | -- | -- |
| 85.81 | 0.431 | 7.4 | 0.889 | -- | 1.64 | -- | -- | 0.411 | -- | 19.2 | 2697 | -- | -- |
| 83.05 | 0.424 | 7.4 | -- | 0.543 | 1.98 | -- | -- | 0.3 | 9.25 | 19.3 | 8108 | -- | -- |
| 129.17 | 0.531 | 7.32 | 1.71 | -- | -- | -- | -- | 0.793 | -- | -- | -- | -- | -- |
| 188.58 | 0.642 | 7.34 | -- | 0.576 | -- | -- | -- | 0.595 | 7.5 | -- | -- | -- | -- |
| 98.21 | 0.462 | 7.44 | -- | -- | 2.11 | -- | -- | 0.24 | -- | 19 | 8270 | -- | -- |
| 206.3 | 0.67 | 7.36 | -- | -- | -- | -- | -- | 0.603 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 18 |
| 12 | 68.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 24 | 68.62 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 19 |
| 31 | 68.82 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 39 | 68.92 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 54 | 69.15 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 16 |
| 88 | 69.53 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 115 | 69.68 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 19 |
| 130 | 69.74 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 152 | 69.83 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 155 | 69.83 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 157 | 69.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 5 |
| 179 | 69.93 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 184 | 69.94 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 185 | 69.94 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 13 |
| 187 | 69.94 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 217 | 70.05 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 14 |
| 218 | 70.05 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 14 |
| 229 | 70.07 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 16 |
| 234 | 70.10 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 270 | 70.20 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 276 | 70.22 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 289 | 70.24 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 319 | 70.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 374 | 70.49 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 385 | 70.51 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 3 |
| 411 | 70.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 607 | 70.95 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 655 | 71.04 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 3 |
| 721 | 71.18 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 6 |
| 729 | 71.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 9 |
| 812 | 71.35 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 9 |
| 901 | 71.53 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 22 |
| 923 | 71.56 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |