Os01g0174100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0174100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.65 | 0.51 | 9.53 | 0.375 | 0.0248 | 1.28 | -2.52 | 2.21 | 0.0954 | 4.99 | 69.33 | 612 | -- | -- |
| 122.68 | 0.516 | 9.52 | 0.517 | 0.194 | 1.4 | 1.83 | -- | 0.134 | 15.7 | 67 | 493 | -- | -- |
| 119.22 | 0.509 | 9.52 | 0.346 | 0.766 | 1.22 | -- | 2.2 | 0.0886 | 5.52 | 62.99 | 1216 | -- | -- |
| 124.89 | 0.52 | 9.51 | 0.585 | 0.801 | 1.23 | -- | -- | 0.0946 | 6.43 | 58.83 | 1376 | -- | -- |
| 140.51 | 0.552 | 9.49 | 0.4 | -- | 1.31 | -- | 2.65 | 0.225 | -- | 61.76 | 2027 | -- | -- |
| 157.57 | 0.588 | 9.53 | 0.57 | 0.722 | -- | -0.986 | -- | 0.023 | 6.38 | -- | -- | -- | -- |
| 159.36 | 0.591 | 9.52 | 0.56 | 0.723 | -- | -- | -- | 0.0279 | 6.91 | -- | -- | -- | -- |
| 135.41 | 0.542 | 9.52 | 0.565 | -- | 1.58 | -- | -- | 0.156 | -- | 60.56 | 1978 | -- | -- |
| 134.29 | 0.54 | 9.52 | -- | 0.796 | 1.25 | -- | -- | 0.0537 | 6.51 | 60 | 1384 | -- | -- |
| 186.77 | 0.639 | 9.54 | 0.576 | -- | -- | -- | -- | 0.0415 | -- | -- | -- | -- | -- |
| 167.63 | 0.606 | 9.54 | -- | 0.729 | -- | -- | -- | -0.0345 | 6.87 | -- | -- | -- | -- |
| 143.32 | 0.558 | 9.52 | -- | -- | 1.59 | -- | -- | 0.118 | -- | 62.17 | 1976 | -- | -- |
| 195.51 | 0.653 | 9.55 | -- | -- | -- | -- | -- | -0.0224 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.06 | wind | 3 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 9 | 113.43 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 12 | 113.48 | humidity | 60 | 1440 | > th | dose dependent | rect. | 3 | 12 |
| 15 | 113.64 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 17 | 113.66 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 19 | 113.72 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 20 | 113.72 | humidity | 60 | 1440 | > th | dose dependent | rect. | 5 | 9 |
| 25 | 113.76 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 27 | 113.79 | temperature | 30 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 42 | 113.96 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 45 | 114.02 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 72 | 114.35 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 21 |
| 81 | 114.36 | humidity | 60 | 1440 | > th | dose dependent | sin | 4 | NA |
| 111 | 114.41 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 21 |
| 113 | 114.43 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 115 | 114.44 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 217 | 114.61 | temperature | 30 | 14400 | < th | dose independent | sin | 22 | NA |
| 259 | 114.67 | temperature | 30 | 14400 | > th | dose independent | sin | 22 | NA |
| 360 | 114.79 | humidity | 70 | 720 | > th | dose dependent | rect. | 6 | 22 |
| 380 | 114.82 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 458 | 114.84 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 463 | 114.88 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 560 | 114.89 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 595 | 114.97 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 637 | 115.18 | temperature | 25 | 14400 | > th | dose dependent | rect. | 20 | 19 |
| 736 | 115.37 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 743 | 115.39 | wind | 1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 777 | 115.45 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 6 |
| 778 | 115.45 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 16 |
| 779 | 115.45 | temperature | 25 | 14400 | > th | dose dependent | rect. | 10 | 18 |
| 780 | 115.45 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 19 |
| 781 | 115.45 | temperature | 25 | 14400 | > th | dose dependent | rect. | 10 | 21 |
| 841 | 115.49 | temperature | 25 | 14400 | > th | dose dependent | sin | 6 | NA |
| 874 | 115.53 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 877 | 115.53 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 22 |
| 984 | 115.61 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 22 |