Os01g0172300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0172300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.46 | 0.306 | 10.4 | -0.373 | 0.891 | -0.674 | -0.312 | -0.057 | 0.174 | 1.14 | 80.31 | 1364 | -- | -- |
| 42.47 | 0.304 | 10.4 | -0.367 | 0.891 | -0.679 | -0.314 | -- | 0.173 | 1.14 | 79.94 | 1364 | -- | -- |
| 42.86 | 0.305 | 10.4 | -0.366 | 0.892 | -0.679 | -- | -0.101 | 0.174 | 1.13 | 80.24 | 1363 | -- | -- |
| 42.87 | 0.305 | 10.4 | -0.353 | 0.892 | -0.689 | -- | -- | 0.174 | 1.12 | 79.88 | 1364 | -- | -- |
| 59.72 | 0.36 | 10.3 | -0.444 | -- | -1.19 | -- | 0.841 | 0.229 | -- | 122 | 5 | -- | -- |
| 53.53 | 0.343 | 10.4 | -0.487 | 0.829 | -- | -0.438 | -- | 0.202 | 1.06 | -- | -- | -- | -- |
| 54.33 | 0.345 | 10.4 | -0.471 | 0.83 | -- | -- | -- | 0.204 | 1.03 | -- | -- | -- | -- |
| 60.52 | 0.364 | 10.4 | -0.414 | -- | -1.17 | -- | -- | 0.172 | -- | 85 | 1658 | -- | -- |
| 46 | 0.316 | 10.4 | -- | 0.897 | -0.754 | -- | -- | 0.202 | 1.1 | 78.11 | 1357 | -- | -- |
| 97.11 | 0.46 | 10.3 | -0.44 | -- | -- | -- | -- | 0.22 | -- | -- | -- | -- | -- |
| 60.18 | 0.363 | 10.3 | -- | 0.822 | -- | -- | -- | 0.257 | 1 | -- | -- | -- | -- |
| 65.04 | 0.377 | 10.3 | -- | -- | -1.18 | -- | -- | 0.217 | -- | 85 | 1658 | -- | -- |
| 102.22 | 0.472 | 10.3 | -- | -- | -- | -- | -- | 0.269 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.32 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 2 | 39.33 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 10 | 2 |
| 17 | 39.86 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 21 | 39.91 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 143 | 40.74 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 6 | NA |
| 187 | 40.95 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 284 | 41.45 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 319 | 41.58 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 22 | 15 |
| 329 | 41.60 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 17 |
| 334 | 41.62 | humidity | 80.0 | 720 | > th | dose independent | rect. | 6 | 16 |
| 337 | 41.62 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 378 | 41.80 | humidity | 70.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 384 | 41.84 | humidity | 80.0 | 720 | > th | dose independent | rect. | 8 | 14 |
| 444 | 41.98 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 460 | 42.01 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 6 | 16 |
| 494 | 42.07 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 501 | 42.08 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 8 | 14 |
| 503 | 42.09 | humidity | 70.0 | 1440 | < th | dose independent | sin | 9 | NA |
| 581 | 42.25 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 792 | 42.53 | humidity | 80.0 | 1440 | < th | dose dependent | no | NA | NA |
| 809 | 42.55 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 872 | 42.69 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 874 | 42.69 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 879 | 42.70 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 885 | 42.71 | humidity | 80.0 | 720 | > th | dose independent | sin | 22 | NA |
| 910 | 42.75 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 919 | 42.78 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 9 |
| 921 | 42.79 | humidity | 70.0 | 720 | > th | dose dependent | sin | 22 | NA |
| 948 | 42.81 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 952 | 42.81 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 6 |